Issues

• Compute Node: If min_free_space cannot be met via GC, node hangs

  kbaseattic/assembly#323 · Filter by author cbun opened on Sep 26, 2016

• KBase image

  kbaseattic/assembly#317 · Filter by author jjkoehorst opened on Nov 21, 2015

• check if we need to add the facheck step for the reapr plugin

  enhancement
  kbaseattic/assembly#312 · Filter by author levinas opened on Jun 18, 2015

• ImportError: No module named packages.urllib3.poolmanager

  kbaseattic/assembly#311 · Filter by author cbun opened on Jun 4, 2015
  1

• add validation on input read length for assemblies involving IDBA

  kbaseattic/assembly#306 · Filter by author brettin opened on Apr 18, 2015

• fix incoherency about running jobs in various pieces

  kbaseattic/assembly#305 · Filter by author sebhtml opened on Apr 7, 2015
  2

  

• Fix plugin to deal with SPAdes core dumps

  enhancement
  kbaseattic/assembly#304 · Filter by author levinas opened on Mar 9, 2015 · v0.6.1: more assemblers, feature collection
  1

• improve arast_score

  enhancement
  kbaseattic/assembly#293 · Filter by author levinas opened on Feb 12, 2015

• add a module for joining overlapping reads

  new feature
  kbaseattic/assembly#292 · Filter by author levinas opened on Feb 12, 2015
  3

• support caching for previously computed datasets

  enhancement
  kbaseattic/assembly#291 · Filter by author levinas opened on Feb 12, 2015
  1

• update ar-filter to remove Phi X contig

  enhancement
  kbaseattic/assembly#286 · Filter by author levinas opened on Feb 5, 2015

• capture basic performance data from jobs

  kbaseattic/assembly#283 · Filter by author levinas opened on Jan 28, 2015 · v0.6.1: more assemblers, feature collection
  6

  

• make compute server talk to rabbitmq indirectly through router

  enhancement
  kbaseattic/assembly#261 · Filter by author levinas opened on Oct 21, 2014
  1

• enable fastq entry for HGAP

  kbaseattic/assembly#254 · Filter by author levinas opened on Oct 16, 2014

• implement plugin for SOAPdenovo

  new feature
  kbaseattic/assembly#253 · Filter by author levinas opened on Oct 16, 2014

• implement plugin for ECTools

  new feature
  kbaseattic/assembly#252 · Filter by author levinas opened on Oct 16, 2014

• get service monitor page back up

  kbaseattic/assembly#245 · Filter by author levinas opened on Oct 14, 2014 · v0.6.1: more assemblers, feature collection
  

• Support hybrid assemblies

  kbaseattic/assembly#243 · Filter by author cbun opened on Oct 9, 2014 · v0.6.1: more assemblers, feature collection
  

• Ability to save pipelines/protocols for reuse

  new feature
  kbaseattic/assembly#242 · Filter by author cbun opened on Sep 23, 2014

• reapr plugin should support smalt threads

  enhancement
  kbaseattic/assembly#239 · Filter by author danielolson5 opened on Sep 9, 2014

• Save/Upload module log files if available

  new feature
  kbaseattic/assembly#235 · Filter by author cbun opened on Sep 3, 2014

• implement a plugin for Pilon

  kbaseattic/assembly#234 · Filter by author levinas opened on Aug 25, 2014

• create an ARAST support email address

  kbaseattic/assembly#233 · Filter by author levinas opened on Aug 22, 2014
  1

• create a mailing list

  kbaseattic/assembly#232 · Filter by author levinas opened on Aug 22, 2014

• find a reference-based assembler and implement it

  new feature
  kbaseattic/assembly#231 · Filter by author levinas opened on Aug 22, 2014 · v0.6.1: more assemblers, feature collection
  2