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adding emdatabase as a dependency - #292

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smribet merged 2 commits into
electronmicroscopy:devfrom
arthurmccray:emdatabase-dependency
Oct 1, 2026
Merged

smribet merged 2 commits into
electronmicroscopy:devfrom
arthurmccray:emdatabase-dependency

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@arthurmccray

@arthurmccray arthurmccray commented Sep 18, 2026 •

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Adds em-database>=0.5 as a runtime dependency so that pip install quantem
is enough to run the tutorials.

Several tutorial notebooks (core/em_data.ipynb, diffractive_imaging/ ptycho_iter_04_MOSS6.ipynb, ptycho_iter_05_multislice.ipynb) import
emdatabase directly to download datasets and model weights. Until now users
had to know to install it separately.

Note the distribution is named em-database on PyPI; the import name is
emdatabase.

Also related: electronmicroscopy/quantem-tutorials#15

@smribet
smribet merged commit 01dc037 into electronmicroscopy:dev Oct 1, 2026
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3 participants