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Scheduled monthly dependency update for September - #457

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pyup-bot wants to merge 15 commits into

pyup-scheduled-update-2026-09-01

Closed

Scheduled monthly dependency update for September#457
pyup-bot wants to merge 15 commits into
masterfrom
pyup-scheduled-update-2026-09-01

Commits on Sep 1, 2026
- Pin cython to latest version 3.3.0
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  committed
  a0e1947
- Pin numpy to latest version 2.5.2
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  66da0d7
- Pin dask to latest version 2026.8.0
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  48aa630
- Pin scipy to latest version 1.18.1
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  7ac1f70
- Pin matplotlib to latest version 3.11.1
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- Pin seaborn to latest version 0.13.2
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- Pin pandas to latest version 3.0.5
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- Pin protopunica to latest version 0.14.8.post2
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- Pin scikit-learn to latest version 1.9.0
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- Pin h5py to latest version 3.16.0
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  72b0862
- Pin numexpr to latest version 2.14.2
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- Pin zarr to latest version 3.3.0
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- Pin hmmlearn to latest version 0.3.3
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- Pin ipython to latest version 9.17.1
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- Pin pyfasta to latest version 0.5.2
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