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s3keys: add the chunkblob refcount and GC-queue keyspaces - #1225

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s3keys: add the chunkblob refcount and GC-queue keyspaces#1225
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@bootjp bootjp commented Sep 8, 2026

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What

First slice of M3 in docs/design/2026_04_25_partial_s3_raft_blob_offload.md — the two Raft-replicated keyspaces §3.5's reference-counted, grace-period blob GC is built on.

!s3|chunkref-rc|<sha-hex>                    -> uint64 reference count
!s3|chunkblob-gc-queue|<commitTS>|<sha-hex>  -> empty

Codecs only. The txn-side RC maintenance, the node-local sweeper, and the orphan scan follow in later PRs; this is the substrate they share, so it lands and gets reviewed on its own.

Decisions worth reviewing

The timestamp lives in the key, not the value. §3.5's reasoning, restated because it drives the whole encoding: a counter resting at zero records that a blob became reclaimable but not when, so the documented grace window would be unimplementable. Putting the commit timestamp in the key name makes "became eligible at T" a first-class, sortable fact.

Fixed-width big-endian, not decimal. The queue must sort by eligibility time so a sweeper finds everything past the grace boundary with one range scan. A decimal encoding orders 9 after 10 and silently returns the wrong set — revert-checked.

ChunkBlobGCQueueScanEnd is exclusive. Callers pass now - grace; an entry stamped exactly at the boundary has not yet served the full window. An inclusive bound would sweep it a hair early — revert-checked.

A malformed reference count fails to decode rather than reading as zero. Zero means "no live reference", so defaulting to it on corruption would make a live blob look collectable — the difference between a space leak and data loss. Revert-checked.

The ordering trap

'-' (0x2D) sorts below '|' (0x7C), so !s3|chunkblob-gc-queue| lands entirely below !s3|chunkblob| rather than inside it. That is the behaviour we want — neither range scan can reach the other's keys — but it is not the behaviour a reader assumes from the names, so TestGCKeyspacesSortOutsideTheChunkBlobRange pins it explicitly. (This is the same class of bug as the !s3route| vs !s3| ordering issue from PR #1088.)

Behavior change / risk

New code only. Nothing reads or writes these keyspaces yet, so there is no runtime behavior change and no on-disk footprint until the sweeper lands. The prefixes are newly reserved and collision-tested against the existing chunkblob and chunkref parsers.

Test evidence

  • go test ./internal/s3keys/ -race -count=1 — pass
  • golangci-lint run ./internal/s3keys/...0 issues, no //nolint
  • Revert-checked (restores verified byte-exact with diff -q):
    1. decimal timestamp → TestChunkBlobGCQueueSortsByEligibilityTime FAILs
    2. inclusive scan end → TestChunkBlobGCQueueScanEndIsExclusive FAILs
    3. malformed RC decoding as zero → TestChunkRefRCValueFailsClosedOnMalformedValue FAILs

11 tests: round-trips, table-driven malformed-input rejection for both parsers, sort order across 0 … MaxUint64, boundary exclusivity, lower-bound coverage, separator unforgeability, and cross-keyspace collision.

Self-review (five passes)

  1. Data loss — the fail-closed RC decode is the load-bearing choice here; a corrupt counter must not read as "unreferenced". Nothing is deleted by this PR.
  2. Concurrency / distributed failures — pure functions over byte slices, no shared state. The keys are designed so the §3.5 conditional delete can serialise sweepers on a write-write conflict against the queue key.
  3. Performance — single allocation per key, pre-sized. No hot path touched.
  4. Data consistency — the sort-order and boundary-exclusivity properties are what make the grace window correct; both are pinned and revert-checked. Cross-keyspace collision is tested in both directions.
  5. Test coverage — as above. Not covered because not yet implemented: RC maintenance inside the chunkref txn, the sweeper's two-phase delete, and the orphan scan.

https://claude.ai/code/session_013rNHooj7NF3giihWVba8QE

Summary by CodeRabbit

  • 新機能

    • チャンクブロブの参照カウント管理とガベージコレクション対象の追跡を支えるキー形式を追加しました。
    • 古い対象から順に検索でき、境界条件や不正な値を安全に扱えるようになりました。
  • ドキュメント

    • M3マイルストーンを「進行中」に更新し、実装済み・未実装の範囲を明確化しました。
  • テスト

    • キーの変換、検索順序、形式検証、既存データとの衝突防止を検証するテストを追加しました。

First slice of the §3.5 blob GC design: the two Raft-replicated
keyspaces the reference-counted grace-period scheme is built on.

  !s3|chunkref-rc|<sha>                    -> uint64 reference count
  !s3|chunkblob-gc-queue|<commitTS>|<sha>  -> empty

The queue carries its timestamp in the KEY, not the value, because a
counter resting at zero records that a blob became reclaimable but not
when — which makes the documented grace window unimplementable. The
timestamp is fixed-width big-endian so the queue sorts by eligibility
time and one range scan finds everything past the boundary; a decimal
encoding would order 9 after 10 and silently return the wrong set.

ChunkBlobGCQueueScanEnd is exclusive: callers pass now-grace, so an
entry stamped exactly at the boundary has not yet served the full
window and is excluded.

A malformed reference count fails to decode rather than reading as
zero. Zero means "no live reference", so defaulting to it on corruption
would make a live blob look collectable.

Includes an ordering test against the existing chunkblob keyspace: '-'
sorts below '|', so !s3|chunkblob-gc-queue| lands entirely BELOW
!s3|chunkblob| rather than inside it, and neither range scan can reach
the other's keys.

Claude-Session: https://claude.ai/code/session_013rNHooj7NF3giihWVba8QE
@bootjp

bootjp commented Sep 8, 2026

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@codex review

@bootjp

bootjp commented Sep 8, 2026

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@claude review

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Codex Review Summary

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Review Status Commit Review trigger
📝 Code Review Completed 2026-09-09T04:34:08.717912Z 9ff9da2 Manual request
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Plan: Advanced

Run ID: 8fbd609a-a35a-4513-97d8-5fafb92977d8

📥 Commits

Reviewing files that changed from the base of the PR and between 8e3ed1d and 9ff9da2.

📒 Files selected for processing (3)
  • docs/design/2026_04_25_partial_s3_raft_blob_offload.md
  • internal/s3keys/chunkblob_gc.go
  • internal/s3keys/chunkblob_gc_test.go
📝 Walkthrough

Walkthrough

チャンク参照カウントキーとGCキューキーのコーデックを追加しました。固定幅のビッグエンディアン時刻でキュー順序と排他的な走査境界を定義しました。不正値の拒否、既存キー空間との分離、関連する設計文書を更新しました。

Changes

チャンクBlob GCキー空間

Layer / File(s) Summary
参照カウントキーと値のコーデック
internal/s3keys/chunkblob_gc.go, internal/s3keys/chunkblob_gc_test.go
参照カウントキーと8バイトのカウンタ値を追加しました。形式不正や長さ不一致を失敗として扱います。
GCキ​​ューキーと走査境界
internal/s3keys/chunkblob_gc.go, internal/s3keys/chunkblob_gc_test.go
コミット時刻とSHA-256を含むGCキューキーを追加しました。ビッグエンディアン時刻でソートし、境界時刻を含まない走査範囲を生成します。
キー空間分離の検証と設計記録
internal/s3keys/chunkblob_gc_test.go, docs/design/.../2026_04_25_partial_s3_raft_blob_offload.md
新しいキーが既存のchunkblob・chunkrefパーサーや範囲走査と衝突しないことを検証しました。M3の実装状態を更新しました。

Estimated code review effort: 3 (Moderate) | ~20 minutes

Merge Risk: 🔵 Low · up to 8e3ed

This adds tested GC key codecs without activating runtime GC behavior. The remaining risk is limited to the milestone documentation table rendering incorrectly and obscuring status text.

🚥 Pre-merge checks | ✅ 4 | ❌ 1

❌ Failed checks (1 warning)

Check name Status Explanation Resolution
Docstring Coverage ⚠️ Warning Docstring coverage is 76.19% which is insufficient. The required threshold is 80.00%. Docstring coverage is scoped to functions touched by this diff. Analyzed 21 functions across 2 files. (1 skipped: … Write docstrings for the functions missing them to satisfy the coverage threshold.
✅ Passed checks (4 passed)
Check name Status Explanation
Description Check ✅ Passed Check skipped - CodeRabbit’s high-level summary is enabled.
Title check ✅ Passed タイトルは、チャンクブロブの参照カウント用キースペースとGCキュー用キースペースの追加という、変更の主目的を正確かつ簡潔に示しています。
Linked Issues check ✅ Passed Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check ✅ Passed Check skipped because no linked issues were found for this pull request.
Full details: Docstring Coverage

Explanation

Docstring coverage is 76.19% which is insufficient. The required threshold is 80.00%. Docstring coverage is scoped to functions touched by this diff. Analyzed 21 functions across 2 files. (1 skipped: 1 unsupported.)

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@claude

claude Bot commented Sep 8, 2026

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Claude finished @bootjp's task in 3m 1s —— View job


Claude finished the review

  • Gather context (PR body, changed files)
  • Read internal/s3keys/chunkblob_gc.go and its test file
  • Read related design doc section (§3.5) and existing chunkblob/chunkref codecs for consistency
  • Run tests and lint locally — could not execute (go test / golangci-lint require approval this session isn't granting; see note below)
  • Post review feedback

Summary

This is a clean, well-scoped codec-only PR. I read chunkblob_gc.go, its test file, the sibling keys.go/chunkref.go codecs, and cross-checked against §3.5 of docs/design/2026_04_25_partial_s3_raft_blob_offload.md. Key formats match the design doc exactly, the fail-closed decode behavior is correctly implemented, and the exclusive scan-boundary math checks out by hand-tracing byte comparisons (a truncated prefix always sorts below any of its own extensions, so ChunkBlobGCQueueScanEnd correctly excludes an entry stamped exactly at the boundary regardless of whether a trailing separator is appended). No correctness bugs found. Two minor, non-blocking points:

1. The chunkBlobGCQueueSeparator comment is self-contradictory (internal/s3keys/chunkblob_gc.go:28-34):

"It must sort below every hex digit ... '|' (0x7C) is above hex, so the separator is chosen to..."

The first clause states an invariant ("must sort below every hex digit") that the second clause immediately contradicts (0x7C is above every hex digit [0-9a-f]). Since the timestamp field is fixed-width (8 bytes), the separator's byte position is already unambiguous without any sort-order property — its actual job (per TestChunkBlobGCQueueSeparatorCannotBeForged) is forgery-prevention: a hex-only SHA can never produce byte 0x7C, so the separator can't be spoofed by SHA content. Worth tightening the comment to state that instead, so a future reader (e.g. whoever writes the M3 sweeper) doesn't reason from an incorrect sorting invariant.
Fix this →

2. Asymmetric ordering-trap test coverage. The PR explicitly calls out and pins (TestGCKeyspacesSortOutsideTheChunkBlobRange) that !s3|chunkblob-gc-queue| sorts entirely below !s3|chunkblob| because '-' (0x2D) < '|' (0x7C). The exact same trap exists between the new !s3|chunkref-rc| and the existing !s3|chunkref| (same hyphenated-infix-over-pipe-delimited-prefix shape), but there's no analogous test pinning that ordering. It's not currently exploitable (nothing range-scans across that boundary yet), but given the PR's own framing — "same class of bug as the !s3route| vs !s3| issue from PR #1088" — pinning it symmetrically would close the gap before the M3 sweeper/orphan-scan PRs start doing range scans near these prefixes.

3. Doc vs. code scan-end shape (non-issue, just noting for future readers): §3.5 of the design doc describes the boundary as !s3|chunkblob-gc-queue|<now-gracePeriod>| (with a trailing separator), while ChunkBlobGCQueueScanEnd omits the trailing | and stops right after the 8-byte timestamp. I traced both by hand and they're behaviorally identical exclusive bounds (a shorter byte string that is a prefix of a longer one always sorts below it, so appending or omitting the separator doesn't change which keys are excluded) — the code's version is actually simpler. No action needed, just flagging in case anyone diffs code against the doc expecting a literal match.

Note on verification

I was not able to run go test ./internal/s3keys/... -race -count=1 or golangci-lint run ./internal/s3keys/... in this session — the sandboxed environment declined to approve those commands. My analysis above is based on careful manual tracing of the byte-comparison logic and cross-referencing against the existing codecs in keys.go/chunkref.go, not on executing the test suite. If you'd like me to actually run the tests, the --allowedTools list for this workflow would need to permit go test/golangci-lint invocations.
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Actionable comments posted: 1

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Inline comments:
In `@docs/design/2026_04_25_partial_s3_raft_blob_offload.md`:
- Line 636: Escape each literal pipe character in the keyspace strings within
the M3 Markdown table row as \|, including pipes inside inline-code spans, so
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Comment thread docs/design/2026_04_25_partial_s3_raft_blob_offload.md Outdated

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Reviewed commit: 8e3ed1d9b0

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Comment thread internal/s3keys/chunkblob_gc.go Outdated
Comment on lines +59 to +62
func EncodeChunkRefRC(count uint64) []byte {
out := make([]byte, u64Bytes)
binary.BigEndian.PutUint64(out, count)
return out

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P2 Badge Retain the queue timestamp with a zero reference count

When a SHA is re-referenced after its count reached zero, the transaction must remove the existing GC-queue entry, but this encoding preserves only the count while ChunkBlobGCQueueKey places the unknown prior timestamp before the SHA. Consequently, the exact queue key cannot be derived from the RC lookup without scanning the entire time-ordered queue. Skipping that expensive scan leaves a stale entry that can become eligible during a later RC-zero interval and delete the blob before the new grace period has elapsed; retain the zero-since timestamp in the RC value or add a SHA-indexed reverse lookup.

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The queue key embeds the eligibility timestamp, so a txn that
re-references a SHA after its count reached zero had no way to name the
queue entry it must delete atomically with the increment. Nothing in
the count value told it when the entry was created. A stale entry left
behind would point the sweeper at a blob that is live again.

ChunkRefRC now carries QueuedAtNanos alongside the count, so the
re-referencing txn can reconstruct the exact key. Queued() reports
whether an entry exists at all.

Also escapes the pipes in the design doc's milestone table; unescaped
"|" inside inline code split the row into seven columns and hid the
status text.

Claude-Session: https://claude.ai/code/session_013rNHooj7NF3giihWVba8QE
@bootjp

bootjp commented Sep 9, 2026

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9ff9da2e — both fixed, and the first one was a genuine design gap I'd missed.

The re-reference path was unimplementable as designed. Correct: §3.5 requires a txn that re-references a SHA to delete its GC-queue entry atomically with incrementing the count — but the queue key embeds the eligibility timestamp, and nothing in the count value told that txn when the entry was created. It could not name the key it had to delete, so a stale entry would survive and point the sweeper at a blob that is live again.

ChunkRefRC now carries QueuedAtNanos alongside Count, so the re-referencing txn reconstructs the exact key; Queued() reports whether an entry exists. This is the kind of gap that only shows when you try to write the consumer, so it is much better caught here than in the sweeper PR.

Markdown table — also correct, and my error: unescaped | inside inline code split the milestone row into seven columns and hid the status text. Escaped.

Revert-checked, restore byte-exact: dropping QueuedAtNanos from the encoding → TestChunkRefRCCarriesTheQueueTimestamp FAILs.

go test ./internal/s3keys/ -race: pass. golangci-lint: 0 issues.

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Comment on lines +153 to +156
func ChunkBlobGCQueueScanEnd(boundaryNanos uint64) []byte {
out := make([]byte, 0, len(ChunkBlobGCQueuePrefix)+u64Bytes)
out = append(out, chunkBlobGCQueuePrefixBytes...)
return binary.BigEndian.AppendUint64(out, boundaryNanos)

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P2 Badge Keep GC boundaries in the HLC timestamp domain

commitTS is not a Unix-nanosecond value: kv/hlc.go encodes it as (UnixMilli << 16) | logical, while this API names the scan boundary boundaryNanos and instructs the sweeper to pass now - gracePeriod. If the forthcoming sweeper follows that contract and supplies time.Now().UnixNano()-grace, every HLC-stamped queue key will sort below the much larger boundary, so newly queued blobs become eligible immediately instead of receiving the grace period. Accept an HLC boundary (and name it accordingly), or provide a helper that converts the wall-clock cutoff into the repository's HLC representation.

AGENTS.md reference: AGENTS.md:L33-L35

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Comment on lines +108 to +112
func ChunkBlobGCQueueKey(commitTSNanos uint64, contentSHA256 [chunkBlobSHA256Bytes]byte) []byte {
out := make([]byte, 0,
len(ChunkBlobGCQueuePrefix)+u64Bytes+1+chunkBlobSHA256HexBytes)
out = append(out, chunkBlobGCQueuePrefixBytes...)
out = binary.BigEndian.AppendUint64(out, commitTSNanos)

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P2 Badge Let the coordinator stamp the timestamp into the queue key

When txn-side RC maintenance is added through kv.Coordinator.Dispatch, the mutation keys must be constructed before dispatch, but the authoritative commit timestamp is allocated later inside dispatchTxn; the existing CommitTSValueOffset mechanism can stamp QueuedAtNanos in the RC value but cannot stamp these key bytes. Consequently the required zero-transition transaction cannot atomically create both ChunkBlobGCQueueKey(commitTS, sha) and an RC value carrying that same commit timestamp without obtaining a persistence timestamp outside the coordinator, which is not valid for follower-routed or Phase-D/TSO-backed requests. Add commit-timestamp key patching or base both records on another leader-issued timestamp that is known before the mutation set is built.

AGENTS.md reference: AGENTS.md:L33-L35

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Comment on lines +77 to +78
// Queued reports whether this SHA currently has a GC-queue entry.
func (r ChunkRefRC) Queued() bool { return r.QueuedAtNanos != 0 }

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P3 Badge Preserve queue presence at timestamp zero

The fresh evidence after the prior re-reference fix is that Queued() now uses zero as the absence sentinel while ChunkBlobGCQueueKey(0, sha) remains accepted and TestChunkBlobGCQueueScanStartCoversTheWholeQueue explicitly treats timestamp zero as a valid queue entry. For such a record, a re-reference sees Queued() == false and cannot remove the old entry; if that SHA later drops to zero again, the already-eligible stale entry can make the sweeper delete it before the new grace period expires. Either reject/reserve timestamp zero throughout the queue API or encode queue presence independently of the timestamp.

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