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Chaining with inexact anchors seems to work now. Build (and publish) python wheels #376: Commit ca25f22 pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Allow to choose lower bound from CLI. Build (and publish) python wheels #375: Commit f3552c4 pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
8s
Fix tests. Build (and publish) python wheels #374: Commit 8f1803e pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
9s
Support enforcement_offset in exact alignments. Build (and publish) python wheels #373: Commit 47b11f4 pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
8s
Test max match run lower bound computation for inexact anchors. Build (and publish) python wheels #372: Commit 20893c7 pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Refactor and add max_match_run lower bound algo for inexact anchors. Build (and publish) python wheels #371: Commit 18bf64f pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Fix history graph not merging equal-history nodes. Build (and publish) python wheels #370: Commit 5b1978e pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Refactor lower bound config into struct. Build (and publish) python wheels #369: Commit b495705 pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Abort gap-affine lower bound search earlier. Build (and publish) python wheels #368: Commit 4fdd8bd pushed by sebschmi
10s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Fix docs. Build (and publish) python wheels #367: Commit 472003e pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Fix preprocessed lower bound file organisation. Build (and publish) python wheels #366: Commit e7f02ed pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Fix docs. Build (and publish) python wheels #365: Commit cf33bc1 pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Support inexact chain evaluation. Build (and publish) python wheels #364: Commit d1416cb pushed by sebschmi
10s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Support inexact anchors in chaining cost function. Build (and publish) python wheels #363: Commit 1896b97 pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Implement inexact 34 chaining and adapt existing tests. Build (and publish) python wheels #362: Commit 32785af pushed by sebschmi
11s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Lunch commit. Build (and publish) python wheels #361: Commit cda9aed pushed by sebschmi
10s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Better test fn naming. Build (and publish) python wheels #360: Commit fb06e1f pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Add inexact-specific tests to gap affine chaining. Build (and publish) python wheels #359: Commit 2e3915b pushed by sebschmi
11s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Fix existing inexact gap affine chaining tests. Build (and publish) python wheels #358: Commit 057950e pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Fix exact chaining match run bug. Build (and publish) python wheels #357: Commit 1346d30 pushed by sebschmi
10s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Move history graph into higher-level module. Build (and publish) python wheels #356: Commit fd9aef0 pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Test inexact lower bounds. Build (and publish) python wheels #355: Commit b6d0334 pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Test required alignment history capacity function. Build (and publish) python wheels #354: Commit ce0e7d0 pushed by sebschmi
43s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Make compile. Build (and publish) python wheels #353: Commit 8849fde pushed by sebschmi
9s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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Correct alignment history extension (untested) and fix compilation Build (and publish) python wheels #352: Commit 10ff06d pushed by sebschmi
8s 203-allow-inexact-k-mer-matches-for-tschainalign
203-allow-inexact-k-mer-matches-for-tschainalign
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