HolobiomicsLab
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Perspicacite-AI
Perspicacite-AI PublicAn agentic AI assistant designed for scientists, researchers, and students who want to find and understand academic literature without getting lost in hundreds of papers
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asb-skill-collections
asb-skill-collections PublicEvidence-grounded skills and software-tool records for scientific AI agents, distilled from method papers by the AgenticScienceBuilder pipeline. Metabolomics: 5,859 skills, 909 tools, 21 workflows.
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Repositories
- Perspicacite-AI Public
An agentic AI assistant designed for scientists, researchers, and students who want to find and understand academic literature without getting lost in hundreds of papers
- indicium-adapters Public
The domain-adapter protocol of the Indicium standard: one structural interface, entry-point discovery and composition.
- indicium Public
A versioned standard for a typed scientific claim bound to the evidence that grounds it.
- asb-skill-collections Public
Evidence-grounded skills and software-tool records for scientific AI agents, distilled from method papers by the AgenticScienceBuilder pipeline. Metabolomics: 5,859 skills, 909 tools, 21 workflows.
- asb-schema Public
LinkML schemas for the ASB standard: task cards, capsules, skill bundles and skill collections
- Mimosa-AI Public
Self-evolving AI-Framework for Autonomous Scientific Research (ASR) that writes, runs, and improves its own multi-agent workflows. Powered by MCP tool discovery and Darwinian evolution.
- Magnolia-AI Public
- Toolomics Public
A suite of tools from the Holobiomics Lab for Agents, organized as a set of MCP servers.
- hpc-session Public
One authenticated SSH window to a SLURM cluster: optional VPN, optional TOTP 2FA, connection multiplexing, and job submit/watch/fetch — usable from shells with no terminal.
- MetaBoKG Public
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