Issues

• PCA test replication woes

  GfellerLab/SuperCell#39 · Filter by author bwlewis opened on Sep 24, 2026

• SCimplify_for_Seurat fails with high-cardinality metadata

  GfellerLab/SuperCell#38 · Filter by author oconntk opened on Apr 13, 2026

• SCimplify_for_Seurat() hangs if nonexistent reduction is provided

  GfellerLab/SuperCell#37 · Filter by author Nick-Eagles opened on Mar 31, 2026

• Aggregating fragments from a multi-sample object

  GfellerLab/SuperCell#36 · Filter by author Nick-Eagles opened on Mar 31, 2026

• supercell_purity entropy measure

  GfellerLab/SuperCell#31 · Filter by author simozhou opened on Jun 16, 2025
  1

  

• Error in ge %*% M.AV : Cholmod error 'problem too large' at file ../Core/cholmod_dense.c, line 102 Calls: makeSeuratMC -> supercell_GE -> %*% -> %*% In addition: Warning messages: 1: In asMethod(object) : sparse->dense coercion: allocating vector of size 19.0 GiB 2: In asMethod(object) : sparse->dense coercion: allocating vector of size 2.5 GiB Execution halted

  GfellerLab/SuperCell#29 · Filter by author christophechu opened on Sep 23, 2024
  1