v1.3fix align question qualifier 301, 311, 319 and concept names(140…

CHANGELOG.md

@@ -22,11 +22,19 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/).
   - `mhoccur_ua` "Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)" (lines 309, 389): 81902 Urinary tract infectious disease → 75865 Disorder of urinary system (SNOMED 128606002), closeMatch 0.75. The previous concept covered infections only.
   - `mhoccur_clsh` "High blood cholesterol" (lines 295, 346): 4159131 Dyslipidemia → 4029305 Hypercholesterolemia (SNOMED 13644009), exactMatch 1. The previous concept was broader than the question.
   - `mhoccur_ca` "Cancer (any type)" (lines 306, 380): 4194405 Cancer confirmed (Context-dependent) → 443392 Malignant neoplastic disease (SNOMED 363346000, Disorder), exactMatch 1, the standard concept used for "any cancer" cohort definitions.
+- Health history question rows left unchanged in v1.1 (lines 301, 311, 319): v1.1 corrected the "Yes" → Condition targets for `mhoccur_cogn_1` (line 365), `mhoccur_ear_1` (line 395) and `mhoccur_crt_1` (line 421), but the matching question rows kept the old concepts in `MODIFIER`, `qualifier_concept_id` and `qualifier_source_value`. They now match the Condition targets, so OBSERVATION and CONDITION_OCCURRENCE agree:
+  - `mhoccur_cogn` (line 301): 439795 Minimal cognitive impairment → 4297400 Mild neurocognitive disorder.
+  - `mhoccur_ear` (line 311): 439378 Ear anomalies with hearing impairment → 377889 Hearing loss.
+  - `mhoccur_crt` (line 319): 4317977 Bilateral cataracts → 375545 Cataract.
 
 ### Fixed
 
 - `dcvgmenyn` "Dexcom G6 transmitter returned?" (line 127): `qualifier_concept_id` 1615066 → 2615313 (Transmitter; external, for use with non-durable medical equipment interstitial continuous glucose monitoring system; HCPCS, Device, standard). Concept 1615066 (GLUCOSE TRANSMITTER DEXCOM G6) is not present in the deployed OMOP vocabulary (Databricks `omop_vocab`), and no Dexcom G6 device concept exists there. 2615313 was chosen over 45764014 (Invasive interstitial-fluid glucose monitoring system, SNOMED) because the question and `qualifier_source_value` refer specifically to the transmitter. `qualifier_source_value` is unchanged. Target concept 2005200589 is unchanged.
 
+- `TARGET_CONCEPT_NAME` aligned with the deployed OMOP vocabulary for two rows (metadata only; concept IDs unchanged):
+  - `dvamwendhand_3` (line 140, 763013): "Not Provided" → "Not provided". The map now uses one spelling for this concept.
+  - `cmdosfrq` (line 334, 3042548): "Current Medication, Frequency" → "Current medication, Frequency".
+
 ### Regenerated
 
 - map2omop and open-source public versions, SSSOM and LinkML from the v1.3 common file. Counts (`run_counts.py`): standard 1,409 elements (379 distinct concepts, down from 380 because 607008 is no longer used; the four condition replacements are one-for-one); custom 489 (344); mapped 1,898 (723); designated but unmapped 106.

codemeta.json

@@ -9,7 +9,7 @@
     "issueTracker": "https://github.com/AI-READI/DataElementMaps/issues",
     "version": "v1.3",
     "datePublished": "2026-10-17",
-    "releaseNotes": "Concept map v1.3: line 127 qualifier 1615066 replaced with 2615313; cmtrt_lfst_1 Yes answer 607008 replaced with 45877994; four health history condition concepts corrected (neurological, urinary, high cholesterol, cancer). See CHANGELOG.md.",
+    "releaseNotes": "Concept map v1.3: line 127 qualifier 1615066 replaced with 2615313; cmtrt_lfst_1 Yes answer 607008 replaced with 45877994; four health history condition concepts corrected (neurological, urinary, high cholesterol, cancer); three health history question qualifiers aligned with their v1.1 Condition targets (cognitive impairment, hearing loss, cataract); two concept names aligned with the OMOP vocabulary. See CHANGELOG.md.",
     "dateCreated": "2023-06-28",
     "dateModified": "2026-10-16",
     "applicationCategory": "Scientific",

redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_data.yaml

@@ -2867,7 +2867,7 @@ mappings:
   src_code: dvamwendhand_3
   src_cd_description: Not Provided
   target_concept_id: 763013
-  target_concept_name: Not Provided
+  target_concept_name: Not provided
   target_domain_id: Meas Value
   target_vocabulary_id: SNOMED
   target_concept_class_id: Qualifier Value
@@ -6407,9 +6407,9 @@ mappings:
   target_standard_concept: S
   predicate_id: skos:exactMatch
   confidence: 1.0
-  modifier: '439795'
-  qualifier_concept_id: 439795
-  qualifier_source_value: Minimal cognitive impairment
+  modifier: '4297400'
+  qualifier_concept_id: 4297400
+  qualifier_source_value: Mild neurocognitive disorder
 - mapping_record_id: AIREADI_MAPPING_0301
   map_to_omop: 'Yes'
   transferred_to_fairhub_redcap_dataset: 'Yes'
@@ -6637,9 +6637,9 @@ mappings:
   target_standard_concept: S
   predicate_id: skos:exactMatch
   confidence: 1.0
-  modifier: '439378'
-  qualifier_concept_id: 439378
-  qualifier_source_value: Ear anomalies with hearing impairment
+  modifier: '377889'
+  qualifier_concept_id: 377889
+  qualifier_source_value: Hearing loss
 - mapping_record_id: AIREADI_MAPPING_0311
   map_to_omop: 'Yes'
   transferred_to_fairhub_redcap_dataset: 'Yes'
@@ -6809,9 +6809,9 @@ mappings:
   target_standard_concept: S
   predicate_id: skos:exactMatch
   confidence: 1.0
-  modifier: '4317977'
-  qualifier_concept_id: 4317977
-  qualifier_source_value: Bilateral cataracts
+  modifier: '375545'
+  qualifier_concept_id: 375545
+  qualifier_source_value: Cataract
 - mapping_record_id: AIREADI_MAPPING_0319
   map_to_omop: 'Yes'
   transferred_to_fairhub_redcap_dataset: 'Yes'
@@ -7124,7 +7124,7 @@ mappings:
   src_code: cmdosfrq
   src_cd_description: 'Frequency taken or applied:'
   target_concept_id: 3042548
-  target_concept_name: Current Medication, Frequency
+  target_concept_name: Current medication, Frequency
   target_domain_id: Observation
   target_vocabulary_id: LOINC
   target_concept_class_id: Claims Attachment