diff --git a/DESCRIPTION b/DESCRIPTION index 34d0a6f7..f6bf4bd1 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Type: Package Package: stockplotr Title: Tables and Figures for Stock Assessments -Version: 0.15.0 +Version: 0.15.0.9000 Authors@R: c( person("Samantha", "Schiano", , "samantha.schiano@noaa.gov", role = c("aut", "cre"), comment = c(ORCID = "0009-0003-3744-6428")), diff --git a/data/example_data.rda b/data/example_data.rda index 143cad3f..7aa4f963 100644 Binary files a/data/example_data.rda and b/data/example_data.rda differ diff --git a/inst/resources/ss3_var_names.csv b/inst/resources/ss3_var_names.csv index d0089627..fc83c47a 100644 --- a/inst/resources/ss3_var_names.csv +++ b/inst/resources/ss3_var_names.csv @@ -5,25 +5,25 @@ DERIVED_QUANTITIES,SSB,spawning_biomass,kg DERIVED_QUANTITIES,Recr_Virgin,recruitment_unfished,kg DERIVED_QUANTITIES,Recr_Initial,recruitment_initial,kg DERIVED_QUANTITIES,Recr,recruitment,kg -DERIVED_QUANTITIES,SPRratio,spawning_potential_ratio_ratio, +DERIVED_QUANTITIES,SPRratio,spr_ratio, AGE_SELEX,F,fishing_mortality, DERIVED_QUANTITIES,F,fishing_mortality, F_AT_AGE,F,fishing_mortality, -DERIVED_QUANTITIES,Bratio,biomass_ratio, +DERIVED_QUANTITIES,Bratio,spawning_biomass_ratio, DERIVED_QUANTITIES,SSB_unfished,spawning_biomass_unfished,kg DERIVED_QUANTITIES,Totbio_unfished,biomass_unfished,kg DERIVED_QUANTITIES,SmryBio_unfished,biomass_unfished_midyear,kg DERIVED_QUANTITIES,Recr_unfished,recruitment_unfished,kg DERIVED_QUANTITIES,SSB_Btgt,spawning_biomass_at_biomass_target,kg -DERIVED_QUANTITIES,SPR_Btgt,spawning_potential_ratio_biomass_target, -DERIVED_QUANTITIES,annF_Btgt,annual_F_biomass_target, +DERIVED_QUANTITIES,SPR_Btgt,spr_biomass_target, +DERIVED_QUANTITIES,annF_Btgt,annual_fishing_mortality_biomass_target, DERIVED_QUANTITIES,Dead_Catch_Btgt,dead_catch_biomass_target,kg -DERIVED_QUANTITIES,SSB_SPR,spawning_biomass_spawning_potential_ratio, -DERIVED_QUANTITIES,annF_SPR,fishing_mortality_spawning_potential_ratio, -DERIVED_QUANTITIES,Dead_Catch_SPR,dead_catch_spawning_potential_ratio, +DERIVED_QUANTITIES,SSB_SPR,spawning_biomass_spr, +DERIVED_QUANTITIES,annF_SPR,annual_fishing_mortality_spr, +DERIVED_QUANTITIES,Dead_Catch_SPR,dead_catch_spr, DERIVED_QUANTITIES,SSB_MSY,spawning_biomass_msy,kg -DERIVED_QUANTITIES,SPR_MSY,spawning_potential_ratio_msy, -DERIVED_QUANTITIES,annF_MSY,f_msy, +DERIVED_QUANTITIES,SPR_MSY,spr_msy, +DERIVED_QUANTITIES,annF_MSY,annual_fishing_mortality_msy, DERIVED_QUANTITIES,Dead_Catch_MSY,dead_catch_msy,kg DERIVED_QUANTITIES,Ret_Catch_MSY,catch_msy,kg DERIVED_QUANTITIES,B_MSY/SSB_unfished,biomass_msy_spawning_biomass_unfished,