publications.html

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    "+" equal contribution
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    "*" corrosponding author
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    <em>Italics</em> indicate mentored lab member for the project
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    <strong>Preprints</strong>
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    87. <em>Wu Y</em>+, <em>Xu X</em>+, <em>Liang N</em>, <em>Xia Y</em>, <em>Tan AYN</em>, <em>Yang J</em>, <em>Yang X</em>, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.64898/2026.10.20.760381v1" target="_blank">The effects of DNA repair factor-Cas9 fusions on homing drive performance</a>. 
    <em>bioRxiv</em>, October 2026.
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    86. <em>Xu Z</em>+, <em>Cho YI</em>+, <em>Zhang X</em>+, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.64898/2026.08.03.742636v1" target="_blank">Confinement considerations for CRISPR toxin-antidote gene drive systems</a>. 
    <em>bioRxiv</em>, August 2026.
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    85. <em>Feng R</em>, <em>Tan AYN</em>, <em>Lu Z</em>, <em>Chen Y</em>, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.64898/2026.07.12.738060v2" target="_blank">Two-locus CRISPR toxin-antidote gene drive for confined population modification</a>. 
    <em>bioRxiv</em>, July 2026.
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    84. Yadav AK, <em>Chen W</em>, <strong>Champer J</strong>, Scott MJ.
    <a href="https://www.biorxiv.org/content/10.64898/2026.07.03.736304v2" target="_blank">Target site and guide RNA multiplexing architecture shape homing gene drive efficiency in <em>Drosophila suzukii</em></a>. 
    <em>bioRxiv</em>, July 2026.
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    83. <em>Li J</em>+, <em>Shi C</em>+, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.64898/2026.07.04.736481v1" target="_blank">Comparative assessment of gene drive release patterns and spread with a hex-based model for large-scale simulations</a>. 
    <em>bioRxiv</em>, July 2026.
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    82. <em>Chen W</em>, <em>Liang J</em>, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.64898/2026.05.28.728369v1" target="_blank">Dominant resistance alleles accelerate population suppression by CRISPR-based gene drive</a>. 
    <em>bioRxiv</em>, May 2026.
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    81. <em>Xu X</em>*, <em>Liu Y</em>, <em>Jia X</em>, <em>Yang J</em>, <em>Xia Y</em>, <em>Chen J</em>, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.64898/2026.04.01.715791v1" target="_blank">A confined gene drive for population modification in the malaria vector <em>Anopheles stephensi</em></a>. 
    <em>bioRxiv</em>, April 2026.
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    80. <em>Wang Z</em>, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.64898/2026.03.04.709515v2" target="_blank">Optimal spatial release strategies for confined gene drives and <em>Wolbachia</em></a>. 
    <em>bioRxiv</em>, March 2026.
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    79. Li Y, Qiao Z, Xian C, Hu S, Jia J, Yang L, Li W, Tian M, Yang R, Zhang Q, Hua H, <strong>Champer J</strong>, Ma W*, Zhu Z*.
    <a href="https://www.biorxiv.org/content/10.1101/2025.11.14.688408v1" target="_blank">Yuanyang allele pairs enable engineered obligate co-inheritance for population replacement and suppression</a>. 
    <em>bioRxiv</em>, November 2025.
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    78. <em>Zhou R</em>+, <em>Du J</em>+*, <em>Faber NR</em>, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.1101/2025.11.04.686506v1" target="_blank">Variants in Cas9 and <em>nanos</em> regulatory elements modulate activity and reduce resistance allele formation in homing gene drive</a>. 
    <em>bioRxiv</em>, November 2025.
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    77. <em>Guo J</em>, <em>Chen W</em>, <strong>Champer J</strong>*.
    <a href="https://www.biorxiv.org/content/10.1101/2025.09.20.677490v2" target="_blank">Experimental demonstration of daisy chain gene drive and modelling of daisy suppression systems</a>. 
    <em>bioRxiv</em>, September 2025.
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    76. Liang N+, Li JY+, Ding Y, Wang Y, <strong>Champer J</strong>*, Ren LC*, Gao G*.
    <a href="https://www.biorxiv.org/content/10.1101/2025.06.09.658412v1" target="_blank">A systematic delineation of 3′UTR regulatory elements and their contextual associations</a>. 
    <em>bioRxiv</em>, June 2025.
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    75. <em>Faber N</em>*, <strong>Champer J</strong>, Pannebakker BA, Zwaan BJ, van den Heuvel J.
    <a href="https://www.biorxiv.org/content/10.1101/2025.06.06.658298v1" target="_blank">Investigating multiple types of resistance against a homing gene drive in European populations of <em>Drosophila melanogaster</em></a>. 
    <em>bioRxiv</em>, June 2025.
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    74. <em>Zhang X</em>, <em>Sun W</em>, Kim IK, Messer PW, <strong>Champer J</strong>*. 
    <a href="https://www.biorxiv.org/content/10.1101/2024.08.14.607913v1" target="_blank">Population dynamics in spatial suppression gene drive models and the effect of resistance, density dependence, and life history</a>. 
    <em>bioRxiv</em>, August 2024.
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    <strong>Journal Publications</strong>
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    73. <em>Wu Y</em>, <em>Xia Y</em>, <em>Yao Z</em>, <em>Chen W</em>, <em>Jia X</em>, <em>Liang N</em>*, <strong>Champer J</strong>*.
    <a href="https://www.nature.com/articles/s41467-026-76107-0" target="_blank">Finding the perfect promoter for Cas9 in homing gene drives using single cell transcriptome data</a>. 
    <em>Nature Communications</em>, 2026.
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    72. <em>Chen W</em>+, <em>Yang X</em>+, <em>Guo J</em>+, <em>Han Y</em>+, <strong>Champer J</strong>*.
    <a href="https://www.sciencedirect.com/science/article/pii/S1471492226001327" target="_blank">Gene drives and other transgenic approaches for mosquito control</a>. 
    <em>Trends in Parasitology</em>, 2026.
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    71. Feng X+*, Ding J+, <em>Liu Y</em>, Lopez Del Amo V, Gantz VM, Chen XX, <strong>Champer J</strong>*, Liu F*.
    <a href="https://www.nature.com/articles/s41467-026-73641-9" target="_blank">Self-limiting population suppression gene drive design in the West Nile vector mosquito, <em>Culex quinquefasciatus</em></a>. 
    <em>Nature Communications</em>, 2026.
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    70. <em>Chen W</em>, <em>Wang Z</em>, <strong>Champer J</strong>*.
    <a href="https://www.nature.com/articles/s41467-026-71397-w" target="_blank">Experimental and modeling demonstration of stronger population suppression by gene drive targeting <em>doublesex</em> from dominant female-sterile resistance alleles</a>. 
    <em>Nature Communications</em>, 2026.
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    69. Zhou M, Sun Y, <strong>Champer J</strong>, Huang S, You M, Wang-Pruski G, You S*.
    <a href="https://scijournals.onlinelibrary.wiley.com/doi/10.1002/ps.70784" target="_blank">Disruption of olfactory perception in the <em>Empoasca onukii</em> Matsuda by a defensive green leaf volatile, (Z)-3-hexenal</a>. 
    <em>Pest Management Science</em>, 2026.
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    68. Kim IK+, Tian L+, Chaffee R, Haller BC, <strong>Champer J</strong>@, Messer PW@, Kim J*@.
    <a href="https://www.nature.com/articles/s41477-026-02256-1" target="_blank">Seed dormancy shapes gene drive dynamics in plants</a>. 
    <em>Nature Plants</em>, 2026. @Joint supervision
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    67. <em>Allegretti YH</em>+, <em>Sun W</em>+, <strong>Champer J</strong>*.
    <a href="https://www.sciencedirect.com/science/article/pii/S2589004226005961" target="_blank">A simulation-based deep learning framework for spatially explicit malaria modeling of CRISPR suppression gene drive mosquitoes</a>. 
    <em>iScience</em>, 2026.
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    66. Yang X, Huang W, Wei J, Xu X, <strong>Champer J</strong>*, Zhang L*, Wang J*.
    <a href="https://link.springer.com/article/10.1186/s13071-026-07360-x" target="_blank"> Knockout of aminopeptidase N3 confers resistance to low concentrations of <em>Bacillus thuringiensis</em> Cry4Ba protoxin in <em>Aedes aegypti</em></a>. 
    <em>Parasites & Vectors</em>, 2026.
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    65. <em>Xu X</em>*, <em>Fang J</em>, <em>Chen J</em>, <em>Yang J</em>, <em>Yang X</em>, <em>Hou S</em>, <em>Sun W</em>, <strong>Champer J</strong>*.
    <a href="https://link.springer.com/article/10.1038/s44318-025-00683-y" target="_blank">Assessing target genes for homing suppression gene drive</a>. 
    <em>The EMBO Journal</em>, 2026.
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    64. <em>Chen W</em>, <em>Wu P</em>, <strong>Champer J</strong>*.
    <a href="https://link.springer.com/article/10.1186/s12915-025-02488-1" target="_blank">Strategies to improve the efficiency of homing gene drives with multiplexed gRNAs</a>. 
    <em>BMC Biology</em>, 2025.
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    63. <em>Liu Y</em>, Champer SE, Haller BC, <strong>Champer J</strong>*.
    <a href="https://advanced.onlinelibrary.wiley.com/doi/10.1002/advs.202504653" target="_blank">Modeling control of invasive fire ants by gene drive</a>. 
    <em>Advanced Science</em>, 2025.
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    62. Sun H, Bu L, <em>Zhang X</em>, Zhang Z, Su S, Guo D, Gao C, Palli SR, <strong>Champer J</strong>, Wu S*. 
    <a href="https://link.springer.com/article/10.1007/s00018-025-05722-9"><em>β2-tubulin</em> regulates the development and migration of eupyrene sperm in <em>Spodoptera frugiperda</em></a>. 
    <em>Cellular and Molecular Life Sciences</em>, 2025.
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    61. Davydova S, Liu J, <em>Liu Y</em>, Prince K, Mann J, Kandul NP, Braswell WE, <strong>Champer J</strong>, Akbari OS, Meccariello A*.
    <a href="https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-025-02201-2" target="_blank">A self-limiting Sterile Insect Technique alternative for <em>Ceratitis capitata</em></a>. 
    <em>BMC Biology</em>, 2025.
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    60. <em>Han Y</em>, <strong>Champer J</strong>*. 
    <a href="https://academic.oup.com/mbe/advance-article/doi/10.1093/molbev/msaf048/8046212" target="_blank">A comparative assessment of self-limiting genetic control strategies for population suppression</a>. 
    <em>Molecular Biology and Evolution</em>, 2025.
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    59. <em>Xu X</em>*, <em>Chen J</em>, Wang Y, <em>Liu Y</em>, Zhang Y, <em>Yang J</em>, <em>Yang X</em>, He Z, <strong>Champer J</strong>*. 
    <a href="https://www.nature.com/articles/s41467-025-56290-2" target="_blank">Gene drive-based population suppression in the malaria vector <em>Anopheles stephensi</em></a>. 
    <em>Nature Communications</em>, 2025.
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    58. <em>Yang X</em>, <em>Xu X</em>, Chen Y, Wei J, Huang W, Wu S*, <strong>Champer J</strong>*, Wang J*. 
    <a href="https://link.springer.com/article/10.1007/s10340-024-01864-0" target="_blank">Assessment of drive efficiency and resistance allele formation of a homing gene drive in the mosquito <em>Aedes aegypti</em></a>. 
    <em>Journal of Pest Science</em>, 2025.
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    57. <em>Faber N</em>+*, <em>Xu X</em>+, <em>Chen J</em>, <em>Hou S</em>, <em>Du J</em>, Pannebakker BA, Zwaan BJ, van den Heuvel J, <strong>Champer J</strong>*. 
    <a href="https://www.nature.com/articles/s41467-024-53631-5" target="_blank">Improving the suppressive power of homing gene drive by co-targeting a distant-site female fertility gene</a>. 
    <em>Nature Communications</em>, 2024.
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    56. Champer SE*, Chae B, Haller BC, <strong>Champer J</strong>, Messer PW*. 
    <a href="https://besjournals.onlinelibrary.wiley.com/doi/10.1111/2041-210X.14432" target="_blank">Resource-explicit interactions in spatial population models</a>. 
    <em>Methods in Ecology and Evolution</em>, 2024.
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    55. Wang GH*, Hoffman A*, <strong>Champer J</strong>*. 
    <a href="https://www.annualreviews.org/content/journals/10.1146/annurev-ento-012424-011039" target="_blank">Gene drive and symbiont technologies for control of mosquito-borne diseases</a>. 
    <em>Annual Review of Entomology</em>, 2024.
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    54. <em>Feng R</em>, <strong>Champer J</strong>*. 
    <a href="https://onlinelibrary.wiley.com/doi/10.1111/mec.17530" target="_blank">Deployment of tethered gene drive for confined suppression in continuous space requires avoiding drive wave interference</a>. 
    <em>Molecular Ecology</em>, 2024.
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    53. <em>Chen W</em>, <em>Guo J</em>, <em>Liu Y</em>, <strong>Champer J</strong>*. 
    <a href="https://www.nature.com/articles/s41467-024-52473-5" target="_blank">Population suppression by release of insects carrying a dominant sterile homing gene drive targeting <em>doublesex</em> in <em>Drosophila</em></a>. 
    <em>Nature Communications</em>, 2024.
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    52. <em>Zhu J</em>+, <em>Chen J</em>+, <em>Liu Y</em>+, <em>Xu X</em>, <strong>Champer J</strong>*. 
    <a href="https://link.springer.com/article/10.1186/s12915-024-02004-x" target="_blank">Population suppression with dominant female-lethal alleles is boosted by homing gene drive</a>. 
    <em>BMC Biology</em>, 2024.
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    51. <strong>Champer J</strong>*, Schlenoff D*. 
    <a href="https://academic.oup.com/jinsectscience/article/24/3/25/7697941" target="_blank">Battles between ants (Hymenoptera: Formicidae): a review</a>. 
    <em>Journal of Insect Science</em>, 2024.
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    50. <em>Zhang S</em>, <strong>Champer J</strong>*. 
    <a href="https://royalsocietypublishing.org/doi/full/10.1098/rspb.2024.0500" target="_blank">Performance characteristics allow for confinement of a CRISPR toxin-antidote gene drive for population suppression in a reaction-diffusion model</a>. 
    <em>Proceedings: Biological Sciences</em>, 2024.
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    49. Liu Y, Jiao B, <strong>Champer J</strong>, Qian W*. 
    <a href="https://www.nature.com/articles/s41477-024-01692-1" target="_blank">Overriding Mendelian inheritance in <em>Arabidopsis</em> with a CRISPR toxin-antidote gene drive that impairs pollen germination</a>. 
    <em>Nature Plants</em>, 2024.
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    48. <em>Du J</em>*, <em>Chen W</em>, <em>Jia X</em>, <em>Xu X</em>, <em>Yang E</em>, <em>Zhou R</em>, <em>Zhang Y</em>, <em>Metzloff M</em>, Messer PW, <strong>Champer J</strong>*. 
    <a href="https://www.nature.com/articles/s41467-024-48874-1" target="_blank">Germline Cas9 promoters with improved performance for homing gene drive</a>. 
    <em>Nature Communications</em>, 2024.
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    47. <em>Hou S</em>+, <em>Chen J</em>+, <em>Feng R</em>, <em>Xu X</em>, Liang N, <strong>Champer J</strong>*. 
    <a href="https://www.sciencedirect.com/science/article/abs/pii/S1673852724000705" target="_blank">A homing rescue gene drive with multiplexed gRNAs reaches high frequency in cage populations but generates functional resistance</a>. 
    <em>Journal of Genetics and Genomics</em>, 2024.
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    46. Ma S+, Ni X+, Chen S, Qiao X, <em>Xu X</em>, <em>Chen W</em>, <strong>Champer J</strong>, Huang J*. 
    <a href="https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1011226">A small-molecule approach to restore female sterility phenotype targeted by a homing suppression gene drive in the fruit pest <em>Drosophila suzukii</em></a>. 
    <em>PLoS Genetics</em>, 2024.
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    45. Yang J, <em>Xu X</em>, Wu J, <strong>Champer J</strong>, Xie M*. 
    <a href="https://www.sciencedirect.com/science/article/abs/pii/S0141813024010742" target="_blank">Involvement of miR-8510a-3p in response to Cry1Ac protoxin by regulating <em>PxABCG3</em> in <em>Plutella xylostella</em></a>. 
    <em>International Journal of Biological Macromolecules</em>, 2024.
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    44. Clark AC*, Alexander A, Edison R, Esvelt K, Kamau S, Dutoit L, <strong>Champer J</strong>, Champer S, Messer PW, Gemmell N. 
    <a href="https://onlinelibrary.wiley.com/doi/10.1111/1755-0998.13901">A framework for identifying fertility gene targets for mammalian pest control</a>. 
    <em>Molecular Ecology Resources</em>, 2023.
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    43. <em>Pan M</em>, <strong>Champer J</strong>*. 
    <a href="https://onlinelibrary.wiley.com/doi/10.1111/mec.17131" target="_blank">Making waves: Comparative analysis of gene drive spread characteristics in a continuous space model</a>. 
    <em>Molecular Ecology</em>, 2023.
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    42. <em>Liu Y</em>, <em>Teo W</em>, <em>Yang H</em>, <strong>Champer J</strong>*. 
    <a href="https://onlinelibrary.wiley.com/doi/10.1111/ele.14232" target="_blank">Adversarial interspecies relationships facilitate population suppression by gene drive in spatially explicit models</a>. 
    <em>Ecology Letters</em>, 2023.
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    41. <em>Zhu Y</em>, <strong>Champer J</strong>*. 
    <a href="https://pubs.acs.org/doi/abs/10.1021/acssynbio.2c00611" target="_blank">Simulations reveal high efficiency and confinement of a population suppression CRISPR toxin-antidote gene drive</a>. 
    <em>ACS Synthetic Biology</em>, 2023.
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    40. <em>Chen J</em>, <em>Xu X</em>, <strong>Champer J</strong>*. 
    <a href="https://www.frontiersin.org/articles/10.3389/fbioe.2023.1138702/full" target="_blank">Assessment of distant-site rescue elements for CRISPR toxin-antidote gene drives</a>. 
    <em>Front Bioeng Biotechnol</em>, 2023.
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    39. <em>Li J</em>, <strong>Champer J</strong>*. 
    <a href="https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1010591" target="_blank">Harnessing <em>Wolbachia</em> cytoplasmic incompatibility alleles for confined gene drive: a modeling study</a>. 
    <em>PLoS Genetics</em>, 2023.
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    38. <em>Champer SE</em>+, <em>Kim IK</em>+, Clark AG, Messer PW, <strong>Champer J</strong>*. 
    <a href="https://elifesciences.org/articles/79121" target="_blank"><em>Anopheles</em> homing suppression drive candidates exhibit unexpected performance differences in simulations with spatial structure</a>. 
    <em>eLife</em>, 2022.
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    37. <em>Langmüller AM</em>+, <strong>Champer J</strong>+*, <em>Lapinska S</em>, <em>Xie L</em>, <em>Metzloff M</em>, <em>Champer SE</em>, <em>Liu J</em>, <em>Xu Y</em>, <em>Du J</em>, Clark AG, Messer PW*. 
    <a href="https://elifesciences.org/articles/71809" target="_blank">Fitness effects of CRISPR endonucleases in <em>Drosophila melanogaster</em> populations</a>. 
    <em>eLife</em>, 2022.
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    36. <em>Metzloff M</em>, <em>Yang E</em>, Dhole S, Clark AG, Messer PW, <strong>Champer J</strong>*. 
    <a href="https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-022-01292-5" target="_blank">Experimental demonstration of tethered gene drive systems for confined population modification or suppression</a>. 
    <em>BMC Biology</em>, 2022.
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    35. <em>Liu Y</em>, <strong>Champer J</strong>*. 
    <a href="https://royalsocietypublishing.org/doi/full/10.1098/rspb.2022.0320" target="_blank">Modelling homing suppression gene drive in haplodiploid organisms</a>. 
    <em>Proceedings: Biological Sciences</em>, 2022.
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    34. <em>Yang E</em>, <em>Metzloff M</em>, <em>Langmüller AM</em>, <em>Xu X</em>, Clark AG, Messer PW, <strong>Champer J</strong>*. 
    <a href="https://academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkac081/6565321" target="_blank">A homing suppression gene drive with multiplexed gRNAs maintains high drive conversion efficiency and avoids functional resistance alleles</a>. 
    <em>G3: Genes, Genomes, Genetics</em>, 2022.
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    33. Wang GH*, <em>Du J</em>, <em>Chu CY</em>, Madhav M, Hughes GL, <strong>Champer J</strong>*.
    <a href="https://www.cell.com/trends/genetics/fulltext/S0168-9525(22)00040-3" target="_blank">Symbionts and gene drive: two strategies to combat vector-borne disease</a>.
    <em>Trends in Genetics</em>, 2022.
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    32. <em>Champer SE</em>, Oakes N, Sharma R, Garc&iacute;a-D&iacute;az P, <strong>Champer J</strong>, Messer PW*.
    <a href="https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009660" target="_blank">Modeling CRISPR gene drives for suppression of invasive rodents</a>.
    <em>PLoS Comput Biol</em>, 17(12), e1009660, 2021.
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    31. Ferreira-Martins D+*, <strong>Champer J</strong>+*, McCauley DW, Zhang Z, Docker MF.
    <a href="https://www.sciencedirect.com/science/article/pii/S0380133021002379" target="_blank">Genetic control of invasive sea lamprey in the Great Lakes</a>.
    <em>J Great Lakes Res</em>, 47(S1), S764-S775, 2021.
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    30. <strong>Champer J</strong>+*, <em>Kim IK</em>+, <em>Champer SE</em>, Clark AG, Messer PW*.
    <a href="https://onlinelibrary.wiley.com/doi/10.1111/mec.15788" target="_blank">Suppression gene drive in continuous space can result in unstable persistence of both drive and wild-type alleles</a>.
    <em>Mol Ecol</em>, 30(4), 1086-1101, 2021.
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    29. Long KC, Alphey L, Annas GJ, Bloss CS, Campbell KJ, <strong>Champer J</strong>, <em>et al</em>.  
    <a href="https://science.sciencemag.org/content/370/6523/1417" target="_blank">Core commitments for field trials of gene drive organisms</a>. 
    <em>Science</em>, 370(6523), 1417-1419, 2020.
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    28. <strong>Champer J</strong>+*, <em>Champer SE</em>+, <em>Kim IK</em>, Clark AG, Messer PW.
    <a href="https://onlinelibrary.wiley.com/doi/full/10.1111/eva.13180" target="_blank">Design and analysis of CRISPR-based underdominance toxin-antidote gene drives</a>.
    <em>Evol Appl</em>, 14(4), 1052-1069, 2020.
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    27. <strong>Champer J</strong>+*, <em>Yang E</em>+, <em>Lee E</em>, <em>Liu J</em>, Clark AG, Messer PW*.
    <a href="https://www.pnas.org/content/117/39/24377" target="_blank">A CRISPR homing gene drive targeting a haplolethal gene removes resistance alleles and successfully spreads through a cage population</a>.
    <em>Proc Natl Acad Sci U S</em>, 117(39), 24377-24383, 2020.
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    26.<strong> Champer J</strong>*, <em>Kim IK</em>, <em>Champer SE</em>, Clark AG, Messer PW.
    <a href="https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-020-0761-2" target="_blank">Performance analysis of novel toxin-antidote CRISPR gene drive systems</a>.
    <em>BMC Biol</em>, 8(1), 27, 2020.
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    25. <strong>Champer J</strong>*, <em>Zhao J</em>, <em>Champer SE</em>, <em>Liu J</em>, Messer PW*.
    <a href="https://pubs.acs.org/doi/10.1021/acssynbio.9b00452" target="_blank">Population dynamics of underdominance gene drive systems in continuous space</a>.
    <em>ACS Synth Biol</em>, 9(4), 779-792, 2020.
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    24. <em>Champer SE</em>, <em>Liu C</em>, <em>Oh SY</em>, <em>Wen Z</em>, Clark AG, Messer PW, <strong>Champer J</strong>*.
    <a href="https://advances.sciencemag.org/content/6/10/eaaz0525" target="_blank">Computational and experimental performance of CRISPR homing gene drive strategies with multiplexed gRNAs</a>.
    <em>Sci Adv</em>, 6(10), eaaz0525, 2020.
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    23. <strong>Champer J</strong>*, <em>Lee E</em>, <em>Yang E</em>, <em>Liu C</em>, Clark AG, Messer PW*.
    <a href="https://www.nature.com/articles/s41467-020-14960-3" target="_blank">A toxin-antidote CRISPR gene drive system for regional population modification</a>.
    <em>Nat Commu</em>, 11(1), 1082, 2020.
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    22. <strong>Champer J</strong>+*, <em>Wen Z</em>+, <em>Luthra A</em>, <em>Reeves R</em>, <em>Chung J</em>, <em>Liu C</em>, <em>Lee YL</em>, <em>Liu J</em>, <em>Yang E</em>, Messer PW, Clark AG*.
    <a href="http://www.genetics.org/content/early/2019/03/27/genetics.119.302037" target="_blank">CRISPR gene drive efficiency and resistance rate is highly heritable with no common genetic loci of large effect</a>.
    <em>Genetics</em>, 212(1), 334-341, 2019.
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    21. <strong>Champer J</strong>*, <em>Chung J</em>, <em>Lee YL</em>, <em>Liu C</em>, <em>Yang E</em>, <em>Wen Z</em>, Clark AG, Messer PW*.
    <a href="https://elifesciences.org/articles/41439" target="_blank">Molecular safeguarding of CRISPR gene drive experiments</a>.
    <em>Elife</em>, 8, e41439, 2019.
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    20. <em>Liu J</em>+, <strong>Champer J</strong>+*, <em>Langmüller AM</em>, <em>Liu C</em>, <em>Chung J</em>, <em>Reeves R</em>, <em>Lee YL</em>, <em>Luthra L</em>, Clark AG, Messer PW*.
    <a href="http://www.genetics.org/content/211/3/1005" target="_blank">Maximum likelihood estimation of fitness components in experimental evolution</a>.
    <em>Genetics</em>, 211(3), 1005-1017, 2019.
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    19. <em>Yu Y</em>*, Dunway S, <strong>Champer J</strong>, Kim J, Alikhan A*.
    Changing our microbiome: Probiotics in dermatology.
    <em> Br J Dermatol</em>, 2019.
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    18. <strong>Champer J</strong>+*, <em>Liu J</em>+, <em>Oh SY</em>, <em>Reeves R</em>, <em>Luthra L</em>, <em>Oakes N</em>, Clark AG, Messer PW*.
    <a href="http://www.pnas.org/content/early/2018/05/04/1720354115" target="_blank">Reducing resistance allele formation in CRISPR gene drive</a>.
    <em>Proc Natl Acad Sci U S A</em>, 115(21), 5522-5527, 2018.
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    17. <em>Champer M</em>*, <em>Wong AM</em>, <strong>Champer J</strong>, Brito IL, Messer PW, Hou JY, Wright JD.
    The role of the vaginal microbiome in gynaecological cancer.
    <em>BJOG</em>, 125(3), 309-315, 2018.
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    16. <strong>Champer J</strong>*, <em>Reeves R</em>, <em>Oh SY</em>, <em>Liu C</em>, <em>Liu J</em>, Clark AG, Messer PW*.
    <a href="https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006796" target="_blank">Novel CRISPR/Cas9 gene drive constructs reveal insights into mechanisms of resistance allele formation and drive efficiency in genetically diverse populations</a>.
    <em>PLoS Genetics</em>, 13(7), e1006796, 2017.
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    15. <strong>Champer J</strong>+, Buchman A+, Akbari OS*.
    <a href="https://www.nature.com/articles/nrg.2015.34" target="_blank">Cheating evolution: Engineering gene drives to manipulate the fate of wild populations</a>.
    <em>Nat Rev Genet</em>, 17, 146-159, 2016.
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    14.<strong> Champer J</strong>, Ito JI, Clemons KV, Stevens DA, Kalkum M*.
    Proteomic analysis of pathogenic fungi reveals highly expressed conserved cell wall proteins.
    <em>J. Fungi</em>, 2(1), 6, 2016.
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    13. <em>Yu Y</em>+, <strong>Champer J</strong>+, Agak GW, Kao S, Modlin RL, Kim J*.
    Different <em>Propionibacterium acnes</em> phylotypes induce distinct immune responses and express unique surface and secreted proteomes.
    <em> J Invest Dermatol</em>, 136(11), 2221-2228, 2016.
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    12. <em>Yu Y</em>, <strong>Champer J</strong>, Kim J*.
    Analysis of the surface, secreted, and intracellular proteome of <em>Propionibacterium acnes</em>.
    <em>EuPA Open Proteom</em>, 9, 1-7, 2015.
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    11. <em>Yu Y</em>, <strong>Champer J</strong>, Beynet DP, Kim J, Friedman AJ*.
    The role of the cutaneous microbiome in skin cancer: Lessons learned from the gut.
    <em>J Drugs Dermatol</em>, 14(5), 461-465, 2015.
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    10. <em>Yu Y</em>, <strong>Champer J</strong>, Garb&aacute;n H, Kim J*.
    Typing of <em>Propionibacterium acnes</em>: A review of methods and comparative analysis.
    <em>Br J Dermatol</em>, 172(5), 1204-1209, 2015.
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    9. Schmidt NW, Agak GW, Deshayes S, <em>Yu Y</em>, Blacker A, <strong>Champer J</strong>, Xian W, Kasko AM, Kim J, Wong GC*.
    PenTobra: An aminoglycoside with robust antimicrobial &amp; membrane activity against <em>Propionibacterium acnes</em>.
    <em>J Invest Dermatol</em>, 135(6), 1581-1589, 2015.
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    8. Chow A, Zhou W, Liu L, Fong MY, <strong>Champer J,</strong> Van Haute D, Chin AR, Ren X, Gugiu BG, Meng Z, Huang W, Ngo V, Kortylewski M, Wang SE*.
    Macrophage immunomodulation by breast cancer-derived exosomes requires Toll-like receptor 2-mediated activation of NF-&kappa;B.
    <em>Sci Rep</em> 4, 5750, 2014.
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    7. <em>Taylor EJM</em>*, <em>Yu Y</em>, <strong>Champer J</strong>, Kim J*.
    Resveratrol demonstrates antimicrobial effects against <em>Propionibacterium acnes</em>.
    <em>Dermatol Ther</em>, 4, 249-257, 2014.
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    6. Lehrnbecher T*, Kalkum M, <strong>Champer J</strong>, Tramsen L, Schmidt S, Klingebiel T.
    Immunotherapy in invasive fungal infection-focus on invasive aspergillosis.
    <em>Curr Pharm Des</em>, 19(20), 3689-3712, 2013.
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    5. <strong>Champer J</strong>*, <em>Patel J</em>, <em>Fernando N</em>, <em>Salehi E</em>, <em>Wong V</em>, Kim J.
    Chitosan against cutaneous pathogens.
    <em>AMB Express</em>, 3(1), 37, 2013.
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    4. Friedman AJ, Phan J, Schairer DO, <strong>Champer J</strong>, Qin M, Pirouz A, Blecher-Paz K, Oren A, Liu PT, Modlin RL, Kim J*.
    Antimicrobial and anti-inflammatory activity of chitosan-alginate nanoparticles: a targeted therapy for cutaneous pathogens.
    <em>J Invest Dermatol</em>, 133(5), 1231-1239, 2013.
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    3. <strong>Champer J</strong>, Diaz-Arevalo D, <em>Champer M</em>, Hong TB, <em>Wong M</em>, <em>Shannahoff M</em>, Ito JI, Clemons KV, Stevens DA, Kalkum M*.
    Protein targets for broad-spectrum mycosis vaccines: quantitative proteomic analysis of <em>Aspergillus</em> and <em>Coccidioides</em> and comparisons with other fungal pathogens.
    <em>Ann N Y Acad Sci</em>, 1273, 44-51, 2012.
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    2. Chandra M, Zang S, Li H, Zimmerman L, <strong>Champer J</strong>, Chow A, Zhou W, Tsuyada A, Yu Y, Gao H, Ren X, Lin RJ, Wang SE*.
    Nuclear translocation of type I TGF-&beta; receptor confers a novel function in RNA splicing.
    <em>Mol Cell Biol</em>, 32(12), 2183-2195, 2012.
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    1. Bungau C, Camanzi B, <strong>Champer J</strong>, Chen Y, Cline DB, Luscher R, Lewin JD, Smith PF*, Smith NJT, Wang H.
    Monte Carlo studies of combined shielding and veto techniques for neutron background reduction in underground dark matter experiments based on liquid noble gas targets.
    <em>Astroparticle Physics</em>, 23, 97-115, 2005.
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    <strong>Book Chapters</strong>
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    4. <em>Zhang X</em>#, <em>Liu Y</em>#, <em>Feng R</em>#, <em>Du J</em>#, <strong>Champer J</strong>. 
    <a href="https://www.sciencedirect.com/science/chapter/referencework/abs/pii/B9780443157509001385" target="_blank">Engineered Gene Drives</a>.
    Published in: “Encyclopedia of Evolutionary Biology.” <em>Elsevier Academic Press</em>, 2026.
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    3. Clark AC, Alexander A, <strong>Champer J</strong>, Edison R, Katuwal M, Gemmell NJ. 
    <a href="https://www.publishing.csiro.au/book/8025/" target="_blank">Management of vertebrate pests using genetic control techniques</a>.
    Published in: “Applied Environmental Genomics.” <em>CSIRO Publishing</em>, 2023.
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    2.<strong>Champer J</strong>. 
    <a href="https://www.taylorfrancis.com/chapters/edit/10.1201/9781003308775-5/gene-drives-anopheles-mosquitoes-jackson-champer" target="_blank">Gene Drives for <em>Anopheles</em> Mosquitoes</a>.
    Published in: “Mosquito Gene Drives and the Malaria Eradication Agenda.” <em>Jenny Stanford Publishing</em>, 2023.
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    1.<strong>Champer J</strong>. 
    <a href="https://www.cabidigitallibrary.org/doi/full/10.1079/9781800621176.0009" target="_blank"><em>Drosophila melanogaster</em> as a Model for Gene Drive Systems</a>.
    Published in: “Transgenic Insects: Techniques and Applications.” <em>CABI</em>, 2022.