From d1094755dcbcacc1b1e02431bb92ecdf560ebb46 Mon Sep 17 00:00:00 2001 From: "Stephanie S. Hong" Date: Sat, 17 Oct 2026 16:03:57 -0400 Subject: [PATCH] Concept map v1.3: Dexcom qualifier, cmtrt_lfst Yes answer, four health history condition concepts --- CHANGELOG.md | 25 +++++++ CITATION.cff | 4 +- codemeta.json | 6 +- ...i_readi_redcap_value_set_mapping_data.yaml | 72 +++++++++---------- ..._readi_redcap_value_set_mapping_summary.md | 12 ++-- ...i_readi_redcap_value_set_mapping.sssom.tsv | 20 +++--- ..._readi_redcap_value_set_mapping.sssom.yaml | 2 +- ..._readi_redcap_value_set_mapping_common.csv | 20 +++--- ...dcap_value_set_mapping_common_map2omop.csv | 20 +++--- ...ng_map2omop_open_source_public_version.csv | 20 +++--- 10 files changed, 113 insertions(+), 88 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 5b168a9..ff33142 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -11,6 +11,31 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/). ## [Unreleased] +## [v1.3] - 2026-10-17 + +### Changed — target concept + +- `cmtrt_lfst_1` "Yes" (line 1873), answer to `cmtrt_lfst` "Do you use lifestyle changes to control your A1C and blood glucose levels?": 607008 (Able to modify behavior and lifestyle to support health improvement, SNOMED Clinical Finding) → 45877994 (Yes, LOINC LA33-6, Meas Value), exactMatch 1. The previous concept described ability rather than practice and did not pair with the "No" answer (`cmtrt_lfst_0`, 45878245 No, LA32-8). In the current OMOP survey data this affects 1,245 participants' "Yes" responses (`value_as_concept_id`); `value_as_string` is unaffected. + +- Health history "Has a doctor or other healthcare professional ever told you that you have/had..." (`2005200014`): four condition concepts corrected. Each change updates the "Yes" answer row (CONDITION_OCCURRENCE target) and the matching question row (`MODIFIER`, `qualifier_concept_id`, `qualifier_source_value` on the OBSERVATION record), so both tables carry the same concept. + - `mhoccur_cns` "Other neurological conditions" (lines 303, 371): 46271045 Neurocognitive disorder → 376337 Disorder of nervous system (SNOMED 118940003), closeMatch 0.75. Neurocognitive disorder covers only cognitive conditions, which have their own questions (dementia, mild cognitive impairment). + - `mhoccur_ua` "Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)" (lines 309, 389): 81902 Urinary tract infectious disease → 75865 Disorder of urinary system (SNOMED 128606002), closeMatch 0.75. The previous concept covered infections only. + - `mhoccur_clsh` "High blood cholesterol" (lines 295, 346): 4159131 Dyslipidemia → 4029305 Hypercholesterolemia (SNOMED 13644009), exactMatch 1. The previous concept was broader than the question. + - `mhoccur_ca` "Cancer (any type)" (lines 306, 380): 4194405 Cancer confirmed (Context-dependent) → 443392 Malignant neoplastic disease (SNOMED 363346000, Disorder), exactMatch 1, the standard concept used for "any cancer" cohort definitions. + +### Fixed + +- `dcvgmenyn` "Dexcom G6 transmitter returned?" (line 127): `qualifier_concept_id` 1615066 → 2615313 (Transmitter; external, for use with non-durable medical equipment interstitial continuous glucose monitoring system; HCPCS, Device, standard). Concept 1615066 (GLUCOSE TRANSMITTER DEXCOM G6) is not present in the deployed OMOP vocabulary (Databricks `omop_vocab`), and no Dexcom G6 device concept exists there. 2615313 was chosen over 45764014 (Invasive interstitial-fluid glucose monitoring system, SNOMED) because the question and `qualifier_source_value` refer specifically to the transmitter. `qualifier_source_value` is unchanged. Target concept 2005200589 is unchanged. + +### Regenerated + +- map2omop and open-source public versions, SSSOM and LinkML from the v1.3 common file. Counts (`run_counts.py`): standard 1,409 elements (379 distinct concepts, down from 380 because 607008 is no longer used; the four condition replacements are one-for-one); custom 489 (344); mapped 1,898 (723); designated but unmapped 106. + +### Downstream + +- Survey ETL must be re-run to apply all v1.3 changes. +- Note for the ETL team: in the current OMOP survey data, "Yes" answers to the `2005200014` health history questions are written as `value_as_concept_id` 4188539 (SNOMED Yes), while the map specifies 45877994 (LOINC Yes, LA33-6). + ## [v1.2.1] - 2026-10-16 ### Fixed diff --git a/CITATION.cff b/CITATION.cff index a15d9f3..7bfbbf0 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -16,8 +16,8 @@ repository-code: "https://github.com/AI-READI/DataElementMaps" repository-artifact: "https://github.com/AI-READI/DataElementMaps/blob/main/manuscript-tvst2026/ai_readi_redcap_value_set_mapping_common.csv" url: "https://aireadi.org" license: MIT -version: "v1.2.1" -date-released: "2026-10-16" +version: "v1.3" +date-released: "2026-10-17" identifiers: - type: doi value: "10.5281/zenodo.23375723" diff --git a/codemeta.json b/codemeta.json index 302c9fe..9713077 100644 --- a/codemeta.json +++ b/codemeta.json @@ -7,9 +7,9 @@ "codeRepository": "https://github.com/AI-READI/DataElementMaps", "downloadUrl": "https://github.com/AI-READI/DataElementMaps", "issueTracker": "https://github.com/AI-READI/DataElementMaps/issues", - "version": "v1.2.1", - "datePublished": "2026-10-16", - "releaseNotes": "Concept map v1.2.1: 4 rows restore concept name changes to v1.1. See CHANGELOG.md.", + "version": "v1.3", + "datePublished": "2026-10-17", + "releaseNotes": "Concept map v1.3: line 127 qualifier 1615066 replaced with 2615313; cmtrt_lfst_1 Yes answer 607008 replaced with 45877994; four health history condition concepts corrected (neurological, urinary, high cholesterol, cancer). See CHANGELOG.md.", "dateCreated": "2023-06-28", "dateModified": "2026-10-16", "applicationCategory": "Scientific", diff --git a/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_data.yaml b/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_data.yaml index 4ef59b3..76fd55f 100644 --- a/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_data.yaml +++ b/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_data.yaml @@ -2614,7 +2614,7 @@ mappings: predicate_id: skos:exactMatch confidence: 1.0 modifier: Dexcom G6 transmitter returned? - qualifier_concept_id: 1615066 + qualifier_concept_id: 2615313 qualifier_source_value: GLUCOSE TRANSMITTER DEXCOM G6 - mapping_record_id: AIREADI_MAPPING_0127 map_to_omop: 'Yes' @@ -6268,9 +6268,9 @@ mappings: target_standard_concept: S predicate_id: skos:exactMatch confidence: 1.0 - modifier: '4159131' - qualifier_concept_id: 4159131 - qualifier_source_value: Dyslipidemia + modifier: '4029305' + qualifier_concept_id: 4029305 + qualifier_source_value: Hypercholesterolemia - mapping_record_id: AIREADI_MAPPING_0295 map_to_omop: 'Yes' transferred_to_fairhub_redcap_dataset: 'Yes' @@ -6453,9 +6453,9 @@ mappings: target_standard_concept: S predicate_id: skos:exactMatch confidence: 1.0 - modifier: '46271045' - qualifier_concept_id: 46271045 - qualifier_source_value: Neurocognitive disorder + modifier: '376337' + qualifier_concept_id: 376337 + qualifier_source_value: Disorder of nervous system - mapping_record_id: AIREADI_MAPPING_0303 map_to_omop: 'Yes' transferred_to_fairhub_redcap_dataset: 'Yes' @@ -6522,9 +6522,9 @@ mappings: target_standard_concept: S predicate_id: skos:exactMatch confidence: 1.0 - modifier: '4194405' - qualifier_concept_id: 4194405 - qualifier_source_value: Cancer confirmed + modifier: '443392' + qualifier_concept_id: 443392 + qualifier_source_value: Malignant neoplastic disease - mapping_record_id: AIREADI_MAPPING_0306 map_to_omop: 'Yes' transferred_to_fairhub_redcap_dataset: 'Yes' @@ -6591,9 +6591,9 @@ mappings: target_standard_concept: S predicate_id: skos:exactMatch confidence: 1.0 - modifier: '81902' - qualifier_concept_id: 81902 - qualifier_source_value: Urinary tract problems + modifier: '75865' + qualifier_concept_id: 75865 + qualifier_source_value: Disorder of urinary system - mapping_record_id: AIREADI_MAPPING_0309 map_to_omop: 'Yes' transferred_to_fairhub_redcap_dataset: 'Yes' @@ -7385,12 +7385,12 @@ mappings: src_code: '1' src_code_id: mhoccur_clsh_1 src_cd_description: 'Yes' - target_concept_id: 4159131 - target_concept_name: Dyslipidemia + target_concept_id: 4029305 + target_concept_name: Hypercholesterolemia target_domain_id: Condition target_vocabulary_id: SNOMED target_concept_class_id: Disorder - target_concept_code: '370992007' + target_concept_code: '13644009' target_standard_concept: S predicate_id: skos:exactMatch confidence: 1.0 @@ -7935,15 +7935,15 @@ mappings: src_code: '1' src_code_id: mhoccur_cns_1 src_cd_description: 'Yes' - target_concept_id: 46271045 - target_concept_name: Neurocognitive disorder + target_concept_id: 376337 + target_concept_name: Disorder of nervous system target_domain_id: Condition target_vocabulary_id: SNOMED target_concept_class_id: Disorder - target_concept_code: '709073001' + target_concept_code: '118940003' target_standard_concept: S - predicate_id: skos:exactMatch - confidence: 1.0 + predicate_id: skos:closeMatch + confidence: 0.75 - mapping_record_id: AIREADI_MAPPING_0371 map_to_omop: 'Yes' transferred_to_fairhub_redcap_dataset: 'Yes' @@ -8133,12 +8133,12 @@ mappings: src_code: '1' src_code_id: mhoccur_ca_1 src_cd_description: 'Yes' - target_concept_id: 4194405 - target_concept_name: Cancer confirmed + target_concept_id: 443392 + target_concept_name: Malignant neoplastic disease target_domain_id: Condition target_vocabulary_id: SNOMED - target_concept_class_id: Context-dependent - target_concept_code: '395099008' + target_concept_class_id: Disorder + target_concept_code: '363346000' target_standard_concept: S predicate_id: skos:exactMatch confidence: 1.0 @@ -8331,15 +8331,15 @@ mappings: src_code: '1' src_code_id: mhoccur_ua_1 src_cd_description: 'Yes' - target_concept_id: 81902 - target_concept_name: Urinary tract infectious disease + target_concept_id: 75865 + target_concept_name: Disorder of urinary system target_domain_id: Condition target_vocabulary_id: SNOMED target_concept_class_id: Disorder - target_concept_code: '68566005' + target_concept_code: '128606002' target_standard_concept: S - predicate_id: skos:exactMatch - confidence: 1.0 + predicate_id: skos:closeMatch + confidence: 0.75 - mapping_record_id: AIREADI_MAPPING_0389 map_to_omop: 'Yes' transferred_to_fairhub_redcap_dataset: 'Yes' @@ -40310,12 +40310,12 @@ mappings: src_code: '1' src_code_id: cmtrt_lfst_1 src_cd_description: 'Yes' - target_concept_id: 607008 - target_concept_name: Able to modify behavior and lifestyle to support health improvement - target_domain_id: Observation - target_vocabulary_id: SNOMED - target_concept_class_id: Clinical Finding - target_concept_code: '1148971005' + target_concept_id: 45877994 + target_concept_name: 'Yes' + target_domain_id: Meas Value + target_vocabulary_id: LOINC + target_concept_class_id: Answer + target_concept_code: LA33-6 target_standard_concept: S predicate_id: skos:exactMatch confidence: 1.0 diff --git a/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_summary.md b/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_summary.md index 0f72537..15df6b4 100644 --- a/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_summary.md +++ b/redCapDataDictionaryWithExtension/linkml/ai_readi_redcap_value_set_mapping_summary.md @@ -22,8 +22,8 @@ - diabetes_survey: 53 ### TARGET_DOMAIN_ID -- Meas Value: 1247 -- Observation: 440 +- Meas Value: 1248 +- Observation: 439 - Measurement: 115 - [blank]: 72 - Unit: 69 @@ -34,9 +34,9 @@ - Route: 1 ### TARGET_VOCABULARY_ID -- LOINC: 1201 +- LOINC: 1202 - AIREADI: 424 -- SNOMED: 129 +- SNOMED: 128 - [blank]: 72 - AIREADI-Vision: 69 - UCUM: 69 @@ -46,8 +46,8 @@ - OMOP Extension: 1 ### PREDICATE_ID -- skos:exactMatch: 1669 -- skos:closeMatch: 261 +- skos:exactMatch: 1667 +- skos:closeMatch: 263 - [blank]: 72 - skos:relatedMatch: 2 diff --git a/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.tsv b/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.tsv index 736405b..33fcacc 100644 --- a/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.tsv +++ b/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.tsv @@ -112,7 +112,7 @@ AIREADI_REDCAP:device_distribution.dvcgmstdat Date sensor inserted skos:exactMat AIREADI_REDCAP:device_distribution.dvenvstdat Date device given to participant skos:exactMatch OMOP:4260905 Date semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation Date device given to participant device_distribution text 1448 dvenvstdat Question 4260905 Observation SNOMED Qualifier Value 410672004 S No open-source Yes 2005200591 device given to participant AIREADI_REDCAP:device_return.dvamwenyn Activity monitor returned? skos:exactMatch OMOP:2005200555 Activity monitor returned? semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation device_return yesno 1707 dvamwenyn Question 2005200555 2005200555 Observation AIREADI Survey S Yes open-source Yes AIREADI_REDCAP:device_return.dvamwendat Date device received back from participant skos:exactMatch OMOP:4260905 Date semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation Date device received back from participant device_return text 1708 dvamwendat Question 4260905 Observation SNOMED Qualifier Value 410672004 S No open-source Yes 2005200604 device received back from participant -AIREADI_REDCAP:device_return.dcvgmenyn Dexcom G6 transmitter returned? skos:exactMatch OMOP:2005200589 Device returned semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation Dexcom G6 transmitter returned? device_return yesno 1711 dcvgmenyn Question 2005200589 2005200589 Observation AIREADI Qualifier Value S Yes open-source Yes 1615066 GLUCOSE TRANSMITTER DEXCOM G6 +AIREADI_REDCAP:device_return.dcvgmenyn Dexcom G6 transmitter returned? skos:exactMatch OMOP:2005200589 Device returned semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation Dexcom G6 transmitter returned? device_return yesno 1711 dcvgmenyn Question 2005200589 2005200589 Observation AIREADI Qualifier Value S Yes open-source Yes 2615313 GLUCOSE TRANSMITTER DEXCOM G6 AIREADI_REDCAP:device_return.dvcgmendat Date device received back from participant skos:exactMatch OMOP:4260905 Date semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation Date device received back from participant device_return text 1713 dvcgmendat Question 4260905 Observation SNOMED Qualifier Value 410672004 S No open-source Yes 2005200604 device received back from participant AIREADI_REDCAP:device_return.dvenvenyn Environmental sensor returned? skos:exactMatch OMOP:2005200589 Device returned semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation Environmental sensor returned? device_return yesno 1716 dvenvenyn Question 2005200589 2005200589 Observation AIREADI Qualifier Value S Yes open-source Yes 45762337 Environmental sensor AIREADI_REDCAP:device_return.dvenvendat Date device received back from participant skos:exactMatch OMOP:4260905 Date semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation Date device received back from participant device_return text 1717 dvenvendat Question 4260905 Observation SNOMED Qualifier Value 410672004 S No open-source Yes 2005200604 device received back from participant @@ -279,7 +279,7 @@ AIREADI_REDCAP:health_survey.mhoccur_mi Heart attack skos:exactMatch OMOP:200520 AIREADI_REDCAP:health_survey.mhoccur_cvdot Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 2005200627 health_survey radio 1123 mhoccur_cvdot Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 2005200627 Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery) AIREADI_REDCAP:health_survey.mhoccur_strk Stroke skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 2005200628 health_survey radio 1124 mhoccur_strk Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 2005200628 Stroke AIREADI_REDCAP:health_survey.mhoccur_circ Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 2005200015 health_survey radio 1125 mhoccur_circ Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 2005200015 Circulation problems -AIREADI_REDCAP:health_survey.mhoccur_clsh High blood cholesterol skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 4159131 health_survey radio 1126 mhoccur_clsh Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 4159131 Dyslipidemia +AIREADI_REDCAP:health_survey.mhoccur_clsh High blood cholesterol skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 4029305 health_survey radio 1126 mhoccur_clsh Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 4029305 Hypercholesterolemia AIREADI_REDCAP:health_survey.mhoccur_hbp High blood pressure skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 316866 health_survey radio 1127 mhoccur_hbp Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 316866 Hypertensive Disorder AIREADI_REDCAP:health_survey.mhoccur_lbp Low blood pressure skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 317002 health_survey radio 1128 mhoccur_lbp Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 317002 Low blood pressure AIREADI_REDCAP:health_survey.mhoccur_pd Parkinson's disease skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 381270 health_survey radio 1129 mhoccur_pd Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 381270 Parkinson's disease @@ -287,13 +287,13 @@ AIREADI_REDCAP:health_survey.mhoccur_ad Dementia (Examples: Alzheimer's Disease, AIREADI_REDCAP:health_survey.mhcat_adot If yes, please choose between: skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 378419 health_survey radio 1131 mhcat_adot Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 378419 Alzheimer's disease AIREADI_REDCAP:health_survey.mhoccur_cogn "Mild cognitive impairment (known as ""MCI""; mild but noticeable cognitive changes, may slow or interfere with daily activities but does not stop them)" skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 439795 health_survey radio 1133 mhoccur_cogn Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 439795 Minimal cognitive impairment AIREADI_REDCAP:health_survey.mhoccur_ms Multiple sclerosis skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 374919 health_survey radio 1134 mhoccur_ms Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 374919 Multiple sclerosis -AIREADI_REDCAP:health_survey.mhoccur_cns Other neurological conditions skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 46271045 health_survey radio 1135 mhoccur_cns Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 46271045 Neurocognitive disorder +AIREADI_REDCAP:health_survey.mhoccur_cns Other neurological conditions skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 376337 health_survey radio 1135 mhoccur_cns Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 376337 Disorder of nervous system AIREADI_REDCAP:health_survey.mhoccur_ra Arthritis (joint pain) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 4291025 health_survey radio 1137 mhoccur_ra Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 4291025 Arthritis AIREADI_REDCAP:health_survey.mhoccur_oa Osteoporosis skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 80502 health_survey radio 1138 mhoccur_oa Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 80502 Osteoporosis -AIREADI_REDCAP:health_survey.mhoccur_ca Cancer (any type) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 4194405 health_survey radio 1139 mhoccur_ca Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 4194405 Cancer confirmed +AIREADI_REDCAP:health_survey.mhoccur_ca Cancer (any type) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 443392 health_survey radio 1139 mhoccur_ca Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 443392 Malignant neoplastic disease AIREADI_REDCAP:health_survey.mhoccur_plm Chronic pulmonary (lung) problems (Examples: emphysema, asthma, tuberculosis, asbestosis) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 4186898 health_survey radio 1141 mhoccur_plm Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 4186898 Chronic lung disease AIREADI_REDCAP:health_survey.mhoccur_gi Digestive problems (Examples: stomach ulcer, gastrointestinal problems, hiatal hernia) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 4201745 health_survey radio 1142 mhoccur_gi Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 4201745 Disorder of digestive system -AIREADI_REDCAP:health_survey.mhoccur_ua Urinary problems (Examples: urinary tract infections, incontinence, prostate problems) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 81902 health_survey radio 1143 mhoccur_ua Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 81902 Urinary tract problems +AIREADI_REDCAP:health_survey.mhoccur_ua Urinary problems (Examples: urinary tract infections, incontinence, prostate problems) skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 75865 health_survey radio 1143 mhoccur_ua Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 75865 Disorder of urinary system AIREADI_REDCAP:health_survey.mhoccur_rnl Kidney problems skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 2005200017 health_survey radio 1144 mhoccur_rnl Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 2005200017 Kidney problems AIREADI_REDCAP:health_survey.mhoccur_ear Hearing impairment skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 439378 health_survey radio 1145 mhoccur_ear Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 439378 Ear anomalies with hearing impairment AIREADI_REDCAP:health_survey.mhoccur_obs Obesity skos:exactMatch OMOP:2005200014 Has a doctor or other healthcare professional ever told you that you have/had... semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation 433736 health_survey radio 1146 mhoccur_obs Question 2005200014 2005200014 Observation AIREADI Survey S Yes open-source Yes 433736 Obesity @@ -330,7 +330,7 @@ AIREADI_REDCAP:health_survey.777.mhoccur_strk_777 Prefer not to say skos:exactMa AIREADI_REDCAP:health_survey.1.mhoccur_circ_1 Yes skos:exactMatch OMOP:2005200015 Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins) semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation health_survey radio mhoccur_circ 1903 1 mhoccur_circ_1 Answer 2005200015 2005200015 Condition AIREADI Disorder S Yes open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_circ_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_circ 1904 0 mhoccur_circ_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_circ_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_circ 1905 777 mhoccur_circ_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes -AIREADI_REDCAP:health_survey.1.mhoccur_clsh_1 Yes skos:exactMatch OMOP:4159131 Dyslipidemia semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_clsh 1906 1 mhoccur_clsh_1 Answer 4159131 Condition SNOMED Disorder 370992007 S No open-source Yes +AIREADI_REDCAP:health_survey.1.mhoccur_clsh_1 Yes skos:exactMatch OMOP:4029305 Hypercholesterolemia semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_clsh 1906 1 mhoccur_clsh_1 Answer 4029305 Condition SNOMED Disorder 13644009 S No open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_clsh_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_clsh 1907 0 mhoccur_clsh_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_clsh_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_clsh 1908 777 mhoccur_clsh_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes AIREADI_REDCAP:health_survey.1.mhoccur_hbp_1 Yes skos:exactMatch OMOP:316866 Hypertensive disorder semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_hbp 1909 1 mhoccur_hbp_1 Answer 316866 Condition SNOMED Disorder 38341003 S No open-source Yes @@ -355,7 +355,7 @@ AIREADI_REDCAP:health_survey.777.mhoccur_cogn_777 Prefer not to say skos:exactMa AIREADI_REDCAP:health_survey.1.mhoccur_ms_1 Yes skos:exactMatch OMOP:374919 Multiple sclerosis semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_ms 1928 1 mhoccur_ms_1 Answer 374919 Condition SNOMED Disorder 24700007 S No open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_ms_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_ms 1929 0 mhoccur_ms_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_ms_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_ms 1930 777 mhoccur_ms_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes -AIREADI_REDCAP:health_survey.1.mhoccur_cns_1 Yes skos:exactMatch OMOP:46271045 Neurocognitive disorder semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_cns 1931 1 mhoccur_cns_1 Answer 46271045 Condition SNOMED Disorder 709073001 S No open-source Yes +AIREADI_REDCAP:health_survey.1.mhoccur_cns_1 Yes skos:closeMatch OMOP:376337 Disorder of nervous system semapv:ManualMappingCuration 0.75 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_cns 1931 1 mhoccur_cns_1 Answer 376337 Condition SNOMED Disorder 118940003 S No open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_cns_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_cns 1932 0 mhoccur_cns_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_cns_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_cns 1933 777 mhoccur_cns_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes AIREADI_REDCAP:health_survey.1.mhoccur_ra_1 Yes skos:exactMatch OMOP:4291025 Arthritis semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_ra 1934 1 mhoccur_ra_1 Answer 4291025 Condition SNOMED Disorder 3723001 S No open-source Yes @@ -364,7 +364,7 @@ AIREADI_REDCAP:health_survey.777.mhoccur_ra_777 Prefer not to say skos:exactMatc AIREADI_REDCAP:health_survey.1.mhoccur_oa_1 Yes skos:exactMatch OMOP:80502 Osteoporosis semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_oa 1937 1 mhoccur_oa_1 Answer 80502 Condition SNOMED Disorder 64859006 S No open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_oa_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_oa 1938 0 mhoccur_oa_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_oa_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_oa 1939 777 mhoccur_oa_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes -AIREADI_REDCAP:health_survey.1.mhoccur_ca_1 Yes skos:exactMatch OMOP:4194405 Cancer confirmed semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_ca 1940 1 mhoccur_ca_1 Answer 4194405 Condition SNOMED Context-dependent 395099008 S No open-source Yes +AIREADI_REDCAP:health_survey.1.mhoccur_ca_1 Yes skos:exactMatch OMOP:443392 Malignant neoplastic disease semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_ca 1940 1 mhoccur_ca_1 Answer 443392 Condition SNOMED Disorder 363346000 S No open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_ca_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_ca 1941 0 mhoccur_ca_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_ca_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_ca 1942 777 mhoccur_ca_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes AIREADI_REDCAP:health_survey.1.mhoccur_plm_1 Yes skos:exactMatch OMOP:4186898 Chronic lung disease semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_plm 1943 1 mhoccur_plm_1 Answer 4186898 Condition SNOMED Disorder 413839001 S No open-source Yes @@ -373,7 +373,7 @@ AIREADI_REDCAP:health_survey.777.mhoccur_plm_777 Prefer not to say skos:exactMat AIREADI_REDCAP:health_survey.1.mhoccur_gi_1 Yes skos:exactMatch OMOP:4201745 Disorder of digestive system semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_gi 1946 1 mhoccur_gi_1 Answer 4201745 Condition SNOMED Disorder 53619000 S No open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_gi_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_gi 1947 0 mhoccur_gi_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_gi_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_gi 1948 777 mhoccur_gi_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes -AIREADI_REDCAP:health_survey.1.mhoccur_ua_1 Yes skos:exactMatch OMOP:81902 Urinary tract infectious disease semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_ua 1949 1 mhoccur_ua_1 Answer 81902 Condition SNOMED Disorder 68566005 S No open-source Yes +AIREADI_REDCAP:health_survey.1.mhoccur_ua_1 Yes skos:closeMatch OMOP:75865 Disorder of urinary system semapv:ManualMappingCuration 0.75 AI-READI REDCap SNOMED AI-READI manual_curation health_survey radio mhoccur_ua 1949 1 mhoccur_ua_1 Answer 75865 Condition SNOMED Disorder 128606002 S No open-source Yes AIREADI_REDCAP:health_survey.0.mhoccur_ua_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_ua 1950 0 mhoccur_ua_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:health_survey.777.mhoccur_ua_777 Prefer not to say skos:exactMatch OMOP:36311156 Prefer not to say semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation health_survey radio mhoccur_ua 1951 777 mhoccur_ua_777 Answer 36311156 Meas Value LOINC Answer LA28803-7 S No open-source Yes AIREADI_REDCAP:health_survey.1.mhoccur_rnl_1 Yes skos:exactMatch OMOP:2005200017 Kidney problems semapv:ManualMappingCuration 1 AI-READI REDCap AIREADI AI-READI manual_curation health_survey radio mhoccur_rnl 1952 1 mhoccur_rnl_1 Answer 2005200017 2005200017 Condition AIREADI Disorder S Yes open-source Yes @@ -1798,7 +1798,7 @@ AIREADI_REDCAP:screening_survey.1.mh_a1c_1 Yes skos:exactMatch OMOP:2005200547 E AIREADI_REDCAP:screening_survey.0.mhterm_dm2_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation screening_survey no mhterm_dm2 0 mhterm_dm2_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:screening_survey.1.cmtrt_insln_1 Yes skos:closeMatch OMOP:440922 Diabetic on insulin semapv:ManualMappingCuration 0.75 AI-READI REDCap SNOMED AI-READI manual_curation screening_survey yesno cmtrt_insln 1 cmtrt_insln_1 Answer 440922 Observation SNOMED Clinical Finding 170747006 S No open-source Yes AIREADI_REDCAP:screening_survey.1.cmtrt_glcs_1 Yes skos:exactMatch OMOP:36714369 Diabetic on non-insulin injectable medication semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation screening_survey yesno cmtrt_glcs 1 cmtrt_glcs_1 Answer 36714369 Observation SNOMED Clinical Finding 719566006 S No open-source Yes -AIREADI_REDCAP:screening_survey.1.cmtrt_lfst_1 Yes skos:exactMatch OMOP:607008 Able to modify behavior and lifestyle to support health improvement semapv:ManualMappingCuration 1 AI-READI REDCap SNOMED AI-READI manual_curation screening_survey yesno cmtrt_lfst 1 cmtrt_lfst_1 Answer 607008 Observation SNOMED Clinical Finding 1148971005 S No open-source Yes +AIREADI_REDCAP:screening_survey.1.cmtrt_lfst_1 Yes skos:exactMatch OMOP:45877994 Yes semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation screening_survey yesno cmtrt_lfst 1 cmtrt_lfst_1 Answer 45877994 Meas Value LOINC Answer LA33-6 S No open-source Yes AIREADI_REDCAP:screening_survey.0.mhterm_predm_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation screening_survey yesno mhterm_predm 0 mhterm_predm_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:screening_survey.0.cmtrt_insln_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation screening_survey yesno cmtrt_insln 0 cmtrt_insln_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes AIREADI_REDCAP:screening_survey.0.cmtrt_glcs_0 No skos:exactMatch OMOP:45878245 No semapv:ManualMappingCuration 1 AI-READI REDCap LOINC AI-READI manual_curation screening_survey yesno cmtrt_glcs 0 cmtrt_glcs_0 Answer 45878245 Meas Value LOINC Answer LA32-8 S No open-source Yes diff --git a/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.yaml b/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.yaml index bfa0bfe..4bca474 100644 --- a/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.yaml +++ b/redCapDataDictionaryWithExtension/sssom/ai_readi_redcap_value_set_mapping.sssom.yaml @@ -15,4 +15,4 @@ curie_map: semapv: https://w3id.org/semapv/vocab/ subject_source: AI-READI REDCap object_source: OMOP Standardized Vocabularies -mapping_date: '2026-10-16' +mapping_date: '2026-10-17' diff --git a/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common.csv b/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common.csv index d3ea730..220e69b 100644 --- a/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common.csv +++ b/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common.csv @@ -124,7 +124,7 @@ Yes,Yes,open-source,No,device_distribution,text,,1441,Question,dvcgmstdat,,Date Yes,Yes,open-source,No,device_distribution,text,,1448,Question,dvenvstdat,,Date device given to participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device given to participant,,2005200591,device given to participant Yes,Yes,open-source,Yes,device_return,yesno,,1707,Question,dvamwenyn,,Activity monitor returned?,2005200555,2005200555,Activity monitor returned?,Observation,AIREADI,Survey,,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,device_return,text,,1708,Question,dvamwendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant -Yes,Yes,open-source,Yes,device_return,yesno,,1711,Question,dcvgmenyn,,Dexcom G6 transmitter returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Dexcom G6 transmitter returned?,,1615066,GLUCOSE TRANSMITTER DEXCOM G6 +Yes,Yes,open-source,Yes,device_return,yesno,,1711,Question,dcvgmenyn,,Dexcom G6 transmitter returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Dexcom G6 transmitter returned?,,2615313,GLUCOSE TRANSMITTER DEXCOM G6 Yes,Yes,open-source,No,device_return,text,,1713,Question,dvcgmendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant Yes,Yes,open-source,Yes,device_return,yesno,,1716,Question,dvenvenyn,,Environmental sensor returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Environmental sensor returned?,,45762337,Environmental sensor Yes,Yes,open-source,No,device_return,text,,1717,Question,dvenvendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant @@ -292,7 +292,7 @@ Yes,Yes,open-source,Yes,health_survey,radio,,1122,Question,mhoccur_mi,,Heart att Yes,Yes,open-source,Yes,health_survey,radio,,1123,Question,mhoccur_cvdot,,"Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200627,,2005200627,"Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery)" Yes,Yes,open-source,Yes,health_survey,radio,,1124,Question,mhoccur_strk,,Stroke,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200628,,2005200628,Stroke Yes,Yes,open-source,Yes,health_survey,radio,,1125,Question,mhoccur_circ,,"Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200015,,2005200015,Circulation problems -Yes,Yes,open-source,Yes,health_survey,radio,,1126,Question,mhoccur_clsh,,High blood cholesterol,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4159131,,4159131,Dyslipidemia +Yes,Yes,open-source,Yes,health_survey,radio,,1126,Question,mhoccur_clsh,,High blood cholesterol,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4029305,,4029305,Hypercholesterolemia Yes,Yes,open-source,Yes,health_survey,radio,,1127,Question,mhoccur_hbp,,High blood pressure,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,316866,,316866,Hypertensive Disorder Yes,Yes,open-source,Yes,health_survey,radio,,1128,Question,mhoccur_lbp,,Low blood pressure,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,317002,,317002,Low blood pressure Yes,Yes,open-source,Yes,health_survey,radio,,1129,Question,mhoccur_pd,,Parkinson's disease,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,381270,,381270,Parkinson's disease @@ -300,13 +300,13 @@ Yes,Yes,open-source,Yes,health_survey,radio,,1130,Question,mhoccur_ad,,"Dementia Yes,Yes,open-source,Yes,health_survey,radio,,1131,Question,mhcat_adot,,"If yes, please choose between:",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,378419,,378419,Alzheimer's disease Yes,Yes,open-source,Yes,health_survey,radio,,1133,Question,mhoccur_cogn,,"Mild cognitive impairment (known as ""MCI""; mild but noticeable cognitive changes, may slow or interfere with daily activities but does not stop them)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,439795,,439795,Minimal cognitive impairment Yes,Yes,open-source,Yes,health_survey,radio,,1134,Question,mhoccur_ms,,Multiple sclerosis,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,374919,,374919,Multiple sclerosis -Yes,Yes,open-source,Yes,health_survey,radio,,1135,Question,mhoccur_cns,,Other neurological conditions,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,46271045,,46271045,Neurocognitive disorder +Yes,Yes,open-source,Yes,health_survey,radio,,1135,Question,mhoccur_cns,,Other neurological conditions,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,376337,,376337,Disorder of nervous system Yes,Yes,open-source,Yes,health_survey,radio,,1137,Question,mhoccur_ra,,Arthritis (joint pain),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4291025,,4291025,Arthritis Yes,Yes,open-source,Yes,health_survey,radio,,1138,Question,mhoccur_oa,,Osteoporosis,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,80502,,80502,Osteoporosis -Yes,Yes,open-source,Yes,health_survey,radio,,1139,Question,mhoccur_ca,,Cancer (any type),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4194405,,4194405,Cancer confirmed +Yes,Yes,open-source,Yes,health_survey,radio,,1139,Question,mhoccur_ca,,Cancer (any type),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,443392,,443392,Malignant neoplastic disease Yes,Yes,open-source,Yes,health_survey,radio,,1141,Question,mhoccur_plm,,"Chronic pulmonary (lung) problems (Examples: emphysema, asthma, tuberculosis, asbestosis)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4186898,,4186898,Chronic lung disease Yes,Yes,open-source,Yes,health_survey,radio,,1142,Question,mhoccur_gi,,"Digestive problems (Examples: stomach ulcer, gastrointestinal problems, hiatal hernia)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4201745,,4201745,Disorder of digestive system -Yes,Yes,open-source,Yes,health_survey,radio,,1143,Question,mhoccur_ua,,"Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,81902,,81902,Urinary tract problems +Yes,Yes,open-source,Yes,health_survey,radio,,1143,Question,mhoccur_ua,,"Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,75865,,75865,Disorder of urinary system Yes,Yes,open-source,Yes,health_survey,radio,,1144,Question,mhoccur_rnl,,Kidney problems,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200017,,2005200017,Kidney problems Yes,Yes,open-source,Yes,health_survey,radio,,1145,Question,mhoccur_ear,,Hearing impairment,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,439378,,439378,Ear anomalies with hearing impairment Yes,Yes,open-source,Yes,health_survey,radio,,1146,Question,mhoccur_obs,,Obesity,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,433736,,433736,Obesity @@ -343,7 +343,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_strk,1902,Answer,777,mhoccur_ Yes,Yes,open-source,Yes,health_survey,radio,mhoccur_circ,1903,Answer,1,mhoccur_circ_1,Yes,2005200015,2005200015,"Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins)",Condition,AIREADI,Disorder,,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_circ,1904,Answer,0,mhoccur_circ_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_circ,1905,Answer,777,mhoccur_circ_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1906,Answer,1,mhoccur_clsh_1,Yes,4159131,,Dyslipidemia,Condition,SNOMED,Disorder,370992007,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1906,Answer,1,mhoccur_clsh_1,Yes,4029305,,Hypercholesterolemia,Condition,SNOMED,Disorder,13644009,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1907,Answer,0,mhoccur_clsh_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1908,Answer,777,mhoccur_clsh_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_hbp,1909,Answer,1,mhoccur_hbp_1,Yes,316866,,Hypertensive disorder,Condition,SNOMED,Disorder,38341003,S,skos:exactMatch,1,,,, @@ -368,7 +368,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_cogn,1927,Answer,777,mhoccur_ Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1928,Answer,1,mhoccur_ms_1,Yes,374919,,Multiple sclerosis,Condition,SNOMED,Disorder,24700007,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1929,Answer,0,mhoccur_ms_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1930,Answer,777,mhoccur_ms_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1931,Answer,1,mhoccur_cns_1,Yes,46271045,,Neurocognitive disorder,Condition,SNOMED,Disorder,709073001,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1931,Answer,1,mhoccur_cns_1,Yes,376337,,Disorder of nervous system,Condition,SNOMED,Disorder,118940003,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1932,Answer,0,mhoccur_cns_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1933,Answer,777,mhoccur_cns_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ra,1934,Answer,1,mhoccur_ra_1,Yes,4291025,,Arthritis,Condition,SNOMED,Disorder,3723001,S,skos:exactMatch,1,,,, @@ -377,7 +377,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_ra,1936,Answer,777,mhoccur_ra Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1937,Answer,1,mhoccur_oa_1,Yes,80502,,Osteoporosis,Condition,SNOMED,Disorder,64859006,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1938,Answer,0,mhoccur_oa_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1939,Answer,777,mhoccur_oa_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1940,Answer,1,mhoccur_ca_1,Yes,4194405,,Cancer confirmed,Condition,SNOMED,Context-dependent,395099008,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1940,Answer,1,mhoccur_ca_1,Yes,443392,,Malignant neoplastic disease,Condition,SNOMED,Disorder,363346000,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1941,Answer,0,mhoccur_ca_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1942,Answer,777,mhoccur_ca_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_plm,1943,Answer,1,mhoccur_plm_1,Yes,4186898,,Chronic lung disease,Condition,SNOMED,Disorder,413839001,S,skos:exactMatch,1,,,, @@ -386,7 +386,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_plm,1945,Answer,777,mhoccur_p Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1946,Answer,1,mhoccur_gi_1,Yes,4201745,,Disorder of digestive system,Condition,SNOMED,Disorder,53619000,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1947,Answer,0,mhoccur_gi_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1948,Answer,777,mhoccur_gi_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1949,Answer,1,mhoccur_ua_1,Yes,81902,,Urinary tract infectious disease,Condition,SNOMED,Disorder,68566005,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1949,Answer,1,mhoccur_ua_1,Yes,75865,,Disorder of urinary system,Condition,SNOMED,Disorder,128606002,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1950,Answer,0,mhoccur_ua_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1951,Answer,777,mhoccur_ua_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,Yes,health_survey,radio,mhoccur_rnl,1952,Answer,1,mhoccur_rnl_1,Yes,2005200017,2005200017,Kidney problems,Condition,AIREADI,Disorder,,S,skos:exactMatch,1,,,, @@ -1870,7 +1870,7 @@ Yes,Yes,open-source,Yes,screening_survey,yes,mh_a1c,,Answer,1,mh_a1c_1,Yes,20052 Yes,Yes,open-source,No,screening_survey,no,mhterm_dm2,,Answer,0,mhterm_dm2_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_insln,,Answer,1,cmtrt_insln_1,Yes,440922,,Diabetic on insulin,Observation,SNOMED,Clinical Finding,170747006,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_glcs,,Answer,1,cmtrt_glcs_1,Yes,36714369,,Diabetic on non-insulin injectable medication,Observation,SNOMED,Clinical Finding,719566006,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_lfst,,Answer,1,cmtrt_lfst_1,Yes,607008,,Able to modify behavior and lifestyle to support health improvement,Observation,SNOMED,Clinical Finding,1148971005,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_lfst,,Answer,1,cmtrt_lfst_1,Yes,45877994,,Yes,Meas Value,LOINC,Answer,LA33-6,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,mhterm_predm,,Answer,0,mhterm_predm_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_insln,,Answer,0,cmtrt_insln_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_glcs,,Answer,0,cmtrt_glcs_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, diff --git a/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common_map2omop.csv b/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common_map2omop.csv index 16137c6..5d583cb 100644 --- a/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common_map2omop.csv +++ b/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_common_map2omop.csv @@ -124,7 +124,7 @@ Yes,Yes,open-source,No,device_distribution,text,,1441,Question,dvcgmstdat,,Date Yes,Yes,open-source,No,device_distribution,text,,1448,Question,dvenvstdat,,Date device given to participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device given to participant,,2005200591,device given to participant Yes,Yes,open-source,Yes,device_return,yesno,,1707,Question,dvamwenyn,,Activity monitor returned?,2005200555,2005200555,Activity monitor returned?,Observation,AIREADI,Survey,,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,device_return,text,,1708,Question,dvamwendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant -Yes,Yes,open-source,Yes,device_return,yesno,,1711,Question,dcvgmenyn,,Dexcom G6 transmitter returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Dexcom G6 transmitter returned?,,1615066,GLUCOSE TRANSMITTER DEXCOM G6 +Yes,Yes,open-source,Yes,device_return,yesno,,1711,Question,dcvgmenyn,,Dexcom G6 transmitter returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Dexcom G6 transmitter returned?,,2615313,GLUCOSE TRANSMITTER DEXCOM G6 Yes,Yes,open-source,No,device_return,text,,1713,Question,dvcgmendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant Yes,Yes,open-source,Yes,device_return,yesno,,1716,Question,dvenvenyn,,Environmental sensor returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Environmental sensor returned?,,45762337,Environmental sensor Yes,Yes,open-source,No,device_return,text,,1717,Question,dvenvendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant @@ -292,7 +292,7 @@ Yes,Yes,open-source,Yes,health_survey,radio,,1122,Question,mhoccur_mi,,Heart att Yes,Yes,open-source,Yes,health_survey,radio,,1123,Question,mhoccur_cvdot,,"Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200627,,2005200627,"Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery)" Yes,Yes,open-source,Yes,health_survey,radio,,1124,Question,mhoccur_strk,,Stroke,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200628,,2005200628,Stroke Yes,Yes,open-source,Yes,health_survey,radio,,1125,Question,mhoccur_circ,,"Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200015,,2005200015,Circulation problems -Yes,Yes,open-source,Yes,health_survey,radio,,1126,Question,mhoccur_clsh,,High blood cholesterol,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4159131,,4159131,Dyslipidemia +Yes,Yes,open-source,Yes,health_survey,radio,,1126,Question,mhoccur_clsh,,High blood cholesterol,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4029305,,4029305,Hypercholesterolemia Yes,Yes,open-source,Yes,health_survey,radio,,1127,Question,mhoccur_hbp,,High blood pressure,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,316866,,316866,Hypertensive Disorder Yes,Yes,open-source,Yes,health_survey,radio,,1128,Question,mhoccur_lbp,,Low blood pressure,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,317002,,317002,Low blood pressure Yes,Yes,open-source,Yes,health_survey,radio,,1129,Question,mhoccur_pd,,Parkinson's disease,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,381270,,381270,Parkinson's disease @@ -300,13 +300,13 @@ Yes,Yes,open-source,Yes,health_survey,radio,,1130,Question,mhoccur_ad,,"Dementia Yes,Yes,open-source,Yes,health_survey,radio,,1131,Question,mhcat_adot,,"If yes, please choose between:",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,378419,,378419,Alzheimer's disease Yes,Yes,open-source,Yes,health_survey,radio,,1133,Question,mhoccur_cogn,,"Mild cognitive impairment (known as ""MCI""; mild but noticeable cognitive changes, may slow or interfere with daily activities but does not stop them)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,439795,,439795,Minimal cognitive impairment Yes,Yes,open-source,Yes,health_survey,radio,,1134,Question,mhoccur_ms,,Multiple sclerosis,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,374919,,374919,Multiple sclerosis -Yes,Yes,open-source,Yes,health_survey,radio,,1135,Question,mhoccur_cns,,Other neurological conditions,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,46271045,,46271045,Neurocognitive disorder +Yes,Yes,open-source,Yes,health_survey,radio,,1135,Question,mhoccur_cns,,Other neurological conditions,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,376337,,376337,Disorder of nervous system Yes,Yes,open-source,Yes,health_survey,radio,,1137,Question,mhoccur_ra,,Arthritis (joint pain),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4291025,,4291025,Arthritis Yes,Yes,open-source,Yes,health_survey,radio,,1138,Question,mhoccur_oa,,Osteoporosis,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,80502,,80502,Osteoporosis -Yes,Yes,open-source,Yes,health_survey,radio,,1139,Question,mhoccur_ca,,Cancer (any type),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4194405,,4194405,Cancer confirmed +Yes,Yes,open-source,Yes,health_survey,radio,,1139,Question,mhoccur_ca,,Cancer (any type),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,443392,,443392,Malignant neoplastic disease Yes,Yes,open-source,Yes,health_survey,radio,,1141,Question,mhoccur_plm,,"Chronic pulmonary (lung) problems (Examples: emphysema, asthma, tuberculosis, asbestosis)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4186898,,4186898,Chronic lung disease Yes,Yes,open-source,Yes,health_survey,radio,,1142,Question,mhoccur_gi,,"Digestive problems (Examples: stomach ulcer, gastrointestinal problems, hiatal hernia)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4201745,,4201745,Disorder of digestive system -Yes,Yes,open-source,Yes,health_survey,radio,,1143,Question,mhoccur_ua,,"Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,81902,,81902,Urinary tract problems +Yes,Yes,open-source,Yes,health_survey,radio,,1143,Question,mhoccur_ua,,"Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,75865,,75865,Disorder of urinary system Yes,Yes,open-source,Yes,health_survey,radio,,1144,Question,mhoccur_rnl,,Kidney problems,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200017,,2005200017,Kidney problems Yes,Yes,open-source,Yes,health_survey,radio,,1145,Question,mhoccur_ear,,Hearing impairment,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,439378,,439378,Ear anomalies with hearing impairment Yes,Yes,open-source,Yes,health_survey,radio,,1146,Question,mhoccur_obs,,Obesity,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,433736,,433736,Obesity @@ -343,7 +343,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_strk,1902,Answer,777,mhoccur_ Yes,Yes,open-source,Yes,health_survey,radio,mhoccur_circ,1903,Answer,1,mhoccur_circ_1,Yes,2005200015,2005200015,"Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins)",Condition,AIREADI,Disorder,,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_circ,1904,Answer,0,mhoccur_circ_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_circ,1905,Answer,777,mhoccur_circ_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1906,Answer,1,mhoccur_clsh_1,Yes,4159131,,Dyslipidemia,Condition,SNOMED,Disorder,370992007,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1906,Answer,1,mhoccur_clsh_1,Yes,4029305,,Hypercholesterolemia,Condition,SNOMED,Disorder,13644009,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1907,Answer,0,mhoccur_clsh_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1908,Answer,777,mhoccur_clsh_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_hbp,1909,Answer,1,mhoccur_hbp_1,Yes,316866,,Hypertensive disorder,Condition,SNOMED,Disorder,38341003,S,skos:exactMatch,1,,,, @@ -368,7 +368,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_cogn,1927,Answer,777,mhoccur_ Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1928,Answer,1,mhoccur_ms_1,Yes,374919,,Multiple sclerosis,Condition,SNOMED,Disorder,24700007,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1929,Answer,0,mhoccur_ms_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1930,Answer,777,mhoccur_ms_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1931,Answer,1,mhoccur_cns_1,Yes,46271045,,Neurocognitive disorder,Condition,SNOMED,Disorder,709073001,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1931,Answer,1,mhoccur_cns_1,Yes,376337,,Disorder of nervous system,Condition,SNOMED,Disorder,118940003,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1932,Answer,0,mhoccur_cns_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1933,Answer,777,mhoccur_cns_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ra,1934,Answer,1,mhoccur_ra_1,Yes,4291025,,Arthritis,Condition,SNOMED,Disorder,3723001,S,skos:exactMatch,1,,,, @@ -377,7 +377,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_ra,1936,Answer,777,mhoccur_ra Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1937,Answer,1,mhoccur_oa_1,Yes,80502,,Osteoporosis,Condition,SNOMED,Disorder,64859006,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1938,Answer,0,mhoccur_oa_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1939,Answer,777,mhoccur_oa_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1940,Answer,1,mhoccur_ca_1,Yes,4194405,,Cancer confirmed,Condition,SNOMED,Context-dependent,395099008,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1940,Answer,1,mhoccur_ca_1,Yes,443392,,Malignant neoplastic disease,Condition,SNOMED,Disorder,363346000,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1941,Answer,0,mhoccur_ca_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1942,Answer,777,mhoccur_ca_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_plm,1943,Answer,1,mhoccur_plm_1,Yes,4186898,,Chronic lung disease,Condition,SNOMED,Disorder,413839001,S,skos:exactMatch,1,,,, @@ -386,7 +386,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_plm,1945,Answer,777,mhoccur_p Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1946,Answer,1,mhoccur_gi_1,Yes,4201745,,Disorder of digestive system,Condition,SNOMED,Disorder,53619000,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1947,Answer,0,mhoccur_gi_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1948,Answer,777,mhoccur_gi_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1949,Answer,1,mhoccur_ua_1,Yes,81902,,Urinary tract infectious disease,Condition,SNOMED,Disorder,68566005,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1949,Answer,1,mhoccur_ua_1,Yes,75865,,Disorder of urinary system,Condition,SNOMED,Disorder,128606002,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1950,Answer,0,mhoccur_ua_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1951,Answer,777,mhoccur_ua_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,Yes,health_survey,radio,mhoccur_rnl,1952,Answer,1,mhoccur_rnl_1,Yes,2005200017,2005200017,Kidney problems,Condition,AIREADI,Disorder,,S,skos:exactMatch,1,,,, @@ -1869,7 +1869,7 @@ Yes,Yes,open-source,Yes,screening_survey,yes,mh_a1c,,Answer,1,mh_a1c_1,Yes,20052 Yes,Yes,open-source,No,screening_survey,no,mhterm_dm2,,Answer,0,mhterm_dm2_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_insln,,Answer,1,cmtrt_insln_1,Yes,440922,,Diabetic on insulin,Observation,SNOMED,Clinical Finding,170747006,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_glcs,,Answer,1,cmtrt_glcs_1,Yes,36714369,,Diabetic on non-insulin injectable medication,Observation,SNOMED,Clinical Finding,719566006,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_lfst,,Answer,1,cmtrt_lfst_1,Yes,607008,,Able to modify behavior and lifestyle to support health improvement,Observation,SNOMED,Clinical Finding,1148971005,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_lfst,,Answer,1,cmtrt_lfst_1,Yes,45877994,,Yes,Meas Value,LOINC,Answer,LA33-6,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,mhterm_predm,,Answer,0,mhterm_predm_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_insln,,Answer,0,cmtrt_insln_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_glcs,,Answer,0,cmtrt_glcs_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, diff --git a/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_map2omop_open_source_public_version.csv b/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_map2omop_open_source_public_version.csv index e885ca4..36e8631 100644 --- a/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_map2omop_open_source_public_version.csv +++ b/redCapDataDictionaryWithExtension/value-set-mapping-common/_ai_readi_redcap_value_set_mapping_map2omop_open_source_public_version.csv @@ -109,7 +109,7 @@ Yes,Yes,open-source,No,device_distribution,text,,1441,Question,dvcgmstdat,,Date Yes,Yes,open-source,No,device_distribution,text,,1448,Question,dvenvstdat,,Date device given to participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device given to participant,,2005200591,device given to participant Yes,Yes,open-source,Yes,device_return,yesno,,1707,Question,dvamwenyn,,Activity monitor returned?,2005200555,2005200555,Activity monitor returned?,Observation,AIREADI,Survey,,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,device_return,text,,1708,Question,dvamwendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant -Yes,Yes,open-source,Yes,device_return,yesno,,1711,Question,dcvgmenyn,,Dexcom G6 transmitter returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Dexcom G6 transmitter returned?,,1615066,GLUCOSE TRANSMITTER DEXCOM G6 +Yes,Yes,open-source,Yes,device_return,yesno,,1711,Question,dcvgmenyn,,Dexcom G6 transmitter returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Dexcom G6 transmitter returned?,,2615313,GLUCOSE TRANSMITTER DEXCOM G6 Yes,Yes,open-source,No,device_return,text,,1713,Question,dvcgmendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant Yes,Yes,open-source,Yes,device_return,yesno,,1716,Question,dvenvenyn,,Environmental sensor returned?,2005200589,2005200589,Device returned,Observation,AIREADI,Qualifier Value,,S,skos:exactMatch,1,Environmental sensor returned?,,45762337,Environmental sensor Yes,Yes,open-source,No,device_return,text,,1717,Question,dvenvendat,,Date device received back from participant,4260905,,Date,Observation,SNOMED,Qualifier Value,410672004,S,skos:exactMatch,1,Date device received back from participant,,2005200604,device received back from participant @@ -275,7 +275,7 @@ Yes,Yes,open-source,Yes,health_survey,radio,,1122,Question,mhoccur_mi,,Heart att Yes,Yes,open-source,Yes,health_survey,radio,,1123,Question,mhoccur_cvdot,,"Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200627,,2005200627,"Other heart issues (Examples: pacemaker, heart valve disease, open heart surgery)" Yes,Yes,open-source,Yes,health_survey,radio,,1124,Question,mhoccur_strk,,Stroke,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200628,,2005200628,Stroke Yes,Yes,open-source,Yes,health_survey,radio,,1125,Question,mhoccur_circ,,"Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200015,,2005200015,Circulation problems -Yes,Yes,open-source,Yes,health_survey,radio,,1126,Question,mhoccur_clsh,,High blood cholesterol,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4159131,,4159131,Dyslipidemia +Yes,Yes,open-source,Yes,health_survey,radio,,1126,Question,mhoccur_clsh,,High blood cholesterol,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4029305,,4029305,Hypercholesterolemia Yes,Yes,open-source,Yes,health_survey,radio,,1127,Question,mhoccur_hbp,,High blood pressure,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,316866,,316866,Hypertensive Disorder Yes,Yes,open-source,Yes,health_survey,radio,,1128,Question,mhoccur_lbp,,Low blood pressure,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,317002,,317002,Low blood pressure Yes,Yes,open-source,Yes,health_survey,radio,,1129,Question,mhoccur_pd,,Parkinson's disease,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,381270,,381270,Parkinson's disease @@ -283,13 +283,13 @@ Yes,Yes,open-source,Yes,health_survey,radio,,1130,Question,mhoccur_ad,,"Dementia Yes,Yes,open-source,Yes,health_survey,radio,,1131,Question,mhcat_adot,,"If yes, please choose between:",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,378419,,378419,Alzheimer's disease Yes,Yes,open-source,Yes,health_survey,radio,,1133,Question,mhoccur_cogn,,"Mild cognitive impairment (known as ""MCI""; mild but noticeable cognitive changes, may slow or interfere with daily activities but does not stop them)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,439795,,439795,Minimal cognitive impairment Yes,Yes,open-source,Yes,health_survey,radio,,1134,Question,mhoccur_ms,,Multiple sclerosis,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,374919,,374919,Multiple sclerosis -Yes,Yes,open-source,Yes,health_survey,radio,,1135,Question,mhoccur_cns,,Other neurological conditions,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,46271045,,46271045,Neurocognitive disorder +Yes,Yes,open-source,Yes,health_survey,radio,,1135,Question,mhoccur_cns,,Other neurological conditions,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,376337,,376337,Disorder of nervous system Yes,Yes,open-source,Yes,health_survey,radio,,1137,Question,mhoccur_ra,,Arthritis (joint pain),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4291025,,4291025,Arthritis Yes,Yes,open-source,Yes,health_survey,radio,,1138,Question,mhoccur_oa,,Osteoporosis,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,80502,,80502,Osteoporosis -Yes,Yes,open-source,Yes,health_survey,radio,,1139,Question,mhoccur_ca,,Cancer (any type),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4194405,,4194405,Cancer confirmed +Yes,Yes,open-source,Yes,health_survey,radio,,1139,Question,mhoccur_ca,,Cancer (any type),2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,443392,,443392,Malignant neoplastic disease Yes,Yes,open-source,Yes,health_survey,radio,,1141,Question,mhoccur_plm,,"Chronic pulmonary (lung) problems (Examples: emphysema, asthma, tuberculosis, asbestosis)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4186898,,4186898,Chronic lung disease Yes,Yes,open-source,Yes,health_survey,radio,,1142,Question,mhoccur_gi,,"Digestive problems (Examples: stomach ulcer, gastrointestinal problems, hiatal hernia)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,4201745,,4201745,Disorder of digestive system -Yes,Yes,open-source,Yes,health_survey,radio,,1143,Question,mhoccur_ua,,"Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,81902,,81902,Urinary tract problems +Yes,Yes,open-source,Yes,health_survey,radio,,1143,Question,mhoccur_ua,,"Urinary problems (Examples: urinary tract infections, incontinence, prostate problems)",2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,75865,,75865,Disorder of urinary system Yes,Yes,open-source,Yes,health_survey,radio,,1144,Question,mhoccur_rnl,,Kidney problems,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,2005200017,,2005200017,Kidney problems Yes,Yes,open-source,Yes,health_survey,radio,,1145,Question,mhoccur_ear,,Hearing impairment,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,439378,,439378,Ear anomalies with hearing impairment Yes,Yes,open-source,Yes,health_survey,radio,,1146,Question,mhoccur_obs,,Obesity,2005200014,2005200014,Has a doctor or other healthcare professional ever told you that you have/had...,Observation,AIREADI,Survey,,S,skos:exactMatch,1,433736,,433736,Obesity @@ -320,7 +320,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_strk,1902,Answer,777,mhoccur_ Yes,Yes,open-source,Yes,health_survey,radio,mhoccur_circ,1903,Answer,1,mhoccur_circ_1,Yes,2005200015,2005200015,"Circulation problems (Examples: arteriosclerosis, atherosclerosis, blood clots in lungs or leg veins)",Condition,AIREADI,Disorder,,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_circ,1904,Answer,0,mhoccur_circ_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_circ,1905,Answer,777,mhoccur_circ_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1906,Answer,1,mhoccur_clsh_1,Yes,4159131,,Dyslipidemia,Condition,SNOMED,Disorder,370992007,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1906,Answer,1,mhoccur_clsh_1,Yes,4029305,,Hypercholesterolemia,Condition,SNOMED,Disorder,13644009,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1907,Answer,0,mhoccur_clsh_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_clsh,1908,Answer,777,mhoccur_clsh_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_hbp,1909,Answer,1,mhoccur_hbp_1,Yes,316866,,Hypertensive disorder,Condition,SNOMED,Disorder,38341003,S,skos:exactMatch,1,,,, @@ -345,7 +345,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_cogn,1927,Answer,777,mhoccur_ Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1928,Answer,1,mhoccur_ms_1,Yes,374919,,Multiple sclerosis,Condition,SNOMED,Disorder,24700007,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1929,Answer,0,mhoccur_ms_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ms,1930,Answer,777,mhoccur_ms_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1931,Answer,1,mhoccur_cns_1,Yes,46271045,,Neurocognitive disorder,Condition,SNOMED,Disorder,709073001,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1931,Answer,1,mhoccur_cns_1,Yes,376337,,Disorder of nervous system,Condition,SNOMED,Disorder,118940003,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1932,Answer,0,mhoccur_cns_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_cns,1933,Answer,777,mhoccur_cns_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ra,1934,Answer,1,mhoccur_ra_1,Yes,4291025,,Arthritis,Condition,SNOMED,Disorder,3723001,S,skos:exactMatch,1,,,, @@ -354,7 +354,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_ra,1936,Answer,777,mhoccur_ra Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1937,Answer,1,mhoccur_oa_1,Yes,80502,,Osteoporosis,Condition,SNOMED,Disorder,64859006,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1938,Answer,0,mhoccur_oa_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_oa,1939,Answer,777,mhoccur_oa_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1940,Answer,1,mhoccur_ca_1,Yes,4194405,,Cancer confirmed,Condition,SNOMED,Context-dependent,395099008,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1940,Answer,1,mhoccur_ca_1,Yes,443392,,Malignant neoplastic disease,Condition,SNOMED,Disorder,363346000,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1941,Answer,0,mhoccur_ca_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ca,1942,Answer,777,mhoccur_ca_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_plm,1943,Answer,1,mhoccur_plm_1,Yes,4186898,,Chronic lung disease,Condition,SNOMED,Disorder,413839001,S,skos:exactMatch,1,,,, @@ -363,7 +363,7 @@ Yes,Yes,open-source,No,health_survey,radio,mhoccur_plm,1945,Answer,777,mhoccur_p Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1946,Answer,1,mhoccur_gi_1,Yes,4201745,,Disorder of digestive system,Condition,SNOMED,Disorder,53619000,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1947,Answer,0,mhoccur_gi_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_gi,1948,Answer,777,mhoccur_gi_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1949,Answer,1,mhoccur_ua_1,Yes,81902,,Urinary tract infectious disease,Condition,SNOMED,Disorder,68566005,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1949,Answer,1,mhoccur_ua_1,Yes,75865,,Disorder of urinary system,Condition,SNOMED,Disorder,128606002,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1950,Answer,0,mhoccur_ua_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,health_survey,radio,mhoccur_ua,1951,Answer,777,mhoccur_ua_777,Prefer not to say,36311156,,Prefer not to say,Meas Value,LOINC,Answer,LA28803-7,S,skos:exactMatch,1,,,, Yes,Yes,open-source,Yes,health_survey,radio,mhoccur_rnl,1952,Answer,1,mhoccur_rnl_1,Yes,2005200017,2005200017,Kidney problems,Condition,AIREADI,Disorder,,S,skos:exactMatch,1,,,, @@ -1764,7 +1764,7 @@ Yes,Yes,open-source,Yes,screening_survey,yes,mh_a1c,,Answer,1,mh_a1c_1,Yes,20052 Yes,Yes,open-source,No,screening_survey,no,mhterm_dm2,,Answer,0,mhterm_dm2_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_insln,,Answer,1,cmtrt_insln_1,Yes,440922,,Diabetic on insulin,Observation,SNOMED,Clinical Finding,170747006,S,skos:closeMatch,0.75,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_glcs,,Answer,1,cmtrt_glcs_1,Yes,36714369,,Diabetic on non-insulin injectable medication,Observation,SNOMED,Clinical Finding,719566006,S,skos:exactMatch,1,,,, -Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_lfst,,Answer,1,cmtrt_lfst_1,Yes,607008,,Able to modify behavior and lifestyle to support health improvement,Observation,SNOMED,Clinical Finding,1148971005,S,skos:exactMatch,1,,,, +Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_lfst,,Answer,1,cmtrt_lfst_1,Yes,45877994,,Yes,Meas Value,LOINC,Answer,LA33-6,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,mhterm_predm,,Answer,0,mhterm_predm_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_insln,,Answer,0,cmtrt_insln_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,, Yes,Yes,open-source,No,screening_survey,yesno,cmtrt_glcs,,Answer,0,cmtrt_glcs_0,No,45878245,,No,Meas Value,LOINC,Answer,LA32-8,S,skos:exactMatch,1,,,,